| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2973 |
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| Symbol | |
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| ID | 5748557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3274750 |
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| End bp | 3276579 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298076 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001563996 |
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| Protein GI | 160898414 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCATT GGATGATTTC TTCGCTGCTG CTGGCCTCGG CGTGTGTGCC GGCCTGGGGC
TCGCATGCCT ATGCCCTGTG GGGCGAACCC CGCTATGCCG AGGGCTTCAG CCATTTCGAC
TATGTCAACG CCAAGGCTCC CAAGGGCGGC GAGCTGCGCC TGGTGAGCAA TCTGCGCATC
TCCACCTTTG ACAAATACAA CCCGTTCACC ATCAAGGGGT CGTCGCCCGC CTATCTGGCG
GAGCTGATGT TCGACACCTT GCTGTGGCCC TCGCTGGACG AGACCGCCAC CGGCTACGGA
TTGCTGGCCG AAGACGTGCA GGCCGCGGCC GACGGCCTGT CCGCCACATT CCGGTTGCGG
CCCCAGGCAC GCTTTCACAA CGGCAAGCCC GTGCTGGCCG CCGATGTCAA GTTCAGCTAT
GACACGCTGG TGGGCCCGCA TGCACTGCCC GGCTACAGAA CGCTGTTCTT CGATGTGGCG
GGCGTCGATG TGCTGGACGA GCGCACCGTG CGCTTTCGCT TCAAGCAGCC GAACCGGGAA
TTGCCGCTGA CCGTGGGGGC CATTCCGGTG TTCAGCCGCG ACTGGGGCGT GGAAAACGGC
AAGGCCAAGC CCTTCGACCA GGTGGTGACG GACACGCCCA TCGGCAGCGG GCCCTACAAG
ATAGGTCCCG TGCGATTCGG CAAGGACATC ACCTATGTGC GTGACCCGGA CTACTGGGGC
CGCGACCTGC CTGTGCGCGT GGGCACGGCC AATTTCGATC GCATCTCCGT CAAGATCTAC
CGCGACAACA CGGCGAGGCT TGAGGCGTTG AAGGCCGGGG AGTTCGACCT CATGCGCTTT
TACAGCGCCG GTGACTGGGC GCGGCGCCTG TACGGCAAGC GCTTCGACCG GGGCGAGCTG
GTCAAGGGCG AGTTCAACAA CAAGCTGCCA TCGGGATTCC AGAGCTATGT GCTCAACGTG
CGCCGGCCTG TGCTGCAGGA CGTCCGGGTG CGCCGCGCCC TGGGCCTGGC CATGGACTAC
GAGTGGATGA ACCGGCAGAT GTTCTACGGT TCCTACCAGC GCGTGCGCGG GCTGTTCGGC
AACACGGCCT GCGAGACCCA TGGCGAGCCT TCGCCAGAGG AGCTGGCGCT GATGGAGCCC
TTGCGCAAGA GCATCCCGCC GGAGGCCTTC GGCCCCATGG CCGAGCCGCC ACGCACCGAT
GGCGACAACT CGCTGCGTGC CAACCTGCGC CAGGCGCGGC AATTGCTGGC CGATGCCGGC
TGGACCATTC AGGATGGCGT GCTGCGCAAC GCGCGGGGCC AGGCCATGGA GCTGGAGTAC
CTGGACAGCA GCGAGTCGGG CATTCGCCAG GTCTCGCCCT GGATACGCAA TCTGGAAAAG
CTGGGCATAC GGCTGCGCTT TCGCTCGGCG GACTTTGCGC TGTACCAGCA GCGCGTGGAG
AAGTTCGACT ACGACATCAT CTCCATCGCC TACCAGGGCA CGAACAATCC GGGCCAGGAG
TTCGCCGACC TGTTCGGCAG CCAGGCGGCG GCAACCGAGG GTTCCGGCAA TTTCCCCGGC
GTGAAGAACC CGGCGGTCGA CGCCATGATC CGCCGCATGA CCGAGGCCAA GACAGAGGCG
CAACTGTTGC CTGCCTGTCA CGCACTCGAA CGCATCATCA CGCACGGCCA CTACCTGATT
CCGCAGTGGA GCGCGGGCAC GCACCGCATG GTCTACGACT CCTGGCGCCT GGTGCGGCCG
GCCGTGGTTC CGGCCTATGC GAAGGGCGAG AGCTGGGCCA TGGACACCTG GTGGGCGCGC
ATGCCGGTGC TGACCGCGCC GCCTCCATGA
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| Protein sequence | MRHWMISSLL LASACVPAWG SHAYALWGEP RYAEGFSHFD YVNAKAPKGG ELRLVSNLRI
STFDKYNPFT IKGSSPAYLA ELMFDTLLWP SLDETATGYG LLAEDVQAAA DGLSATFRLR
PQARFHNGKP VLAADVKFSY DTLVGPHALP GYRTLFFDVA GVDVLDERTV RFRFKQPNRE
LPLTVGAIPV FSRDWGVENG KAKPFDQVVT DTPIGSGPYK IGPVRFGKDI TYVRDPDYWG
RDLPVRVGTA NFDRISVKIY RDNTARLEAL KAGEFDLMRF YSAGDWARRL YGKRFDRGEL
VKGEFNNKLP SGFQSYVLNV RRPVLQDVRV RRALGLAMDY EWMNRQMFYG SYQRVRGLFG
NTACETHGEP SPEELALMEP LRKSIPPEAF GPMAEPPRTD GDNSLRANLR QARQLLADAG
WTIQDGVLRN ARGQAMELEY LDSSESGIRQ VSPWIRNLEK LGIRLRFRSA DFALYQQRVE
KFDYDIISIA YQGTNNPGQE FADLFGSQAA ATEGSGNFPG VKNPAVDAMI RRMTEAKTEA
QLLPACHALE RIITHGHYLI PQWSAGTHRM VYDSWRLVRP AVVPAYAKGE SWAMDTWWAR
MPVLTAPPP
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