Gene Daci_2967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2967 
Symbol 
ID5748551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3269587 
End bp3270582 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content71% 
IMG OID641298070 
Productpyruvate carboxyltransferase 
Protein accessionYP_001563990 
Protein GI160898408 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACAG GTGAATCCGC CACCATCGAC ACCCACCACC GGATGCAACT GCCCATGTCC 
TCCCACCGTT TTGACGTACT CATCAGCGAA GTCGGCCCGC GCGATGGCCT GCAGTCCGTG
GCCTCCACCA TGTCCACGGC GCACAAGCTG GCCTGGATCG CCGCGCTGGC CCATGCAGGC
CTGCAGGAGA TCGAGGTCGG CTCCTTCGTC TCGCCCAAGC TGCTGCCGCA GATGGCCGAC
GCGGCCGAGG TGGTCGCCCA GGCCATCACC CTGCCCGGCG TCACCGTGAT GGCCCTGGCC
CCCAATCTGC GCGGCGCCGA GGCCGCGCTG CGCGCCGGCG CCCACAAGGT CACGCTGCCC
GTCTCGGCCA GCCCCGCGCA CTCCATGGCC AATGTGCGCA AGACGCCCAT GCAGATGGTG
GACGAGGTGC GGGCGATTGC CGCGCTGCGC GACGAGATCG CGCCGCAGGC CCTGATCGAG
GCGGGGATCT CCACGGCCTT CGGCTGCACG CTGCAGGGCC TGGTGCCGGA GGACGAAGTG
ATTGCACTGG CCCTGGCCTG CGTGGCGGCG GGCGCCGATG AATCGGGCCT GTCCGACACC
ACGGGCATGG CCAACCCGGC CCAGGTGCGG CGCCTGTTCA CACGGCTGCG CGCCGAGCTG
GGCGAACATG CAGGCGCGGC CCACATGCAC AATACGCGCG GCCTGGGCCT GGCCAACTGC
CTGGCCGCCT ACGAGGCCGG CGTGCGCACC TTCGATGCCT CGCTGGCCGG CCTGGGCGGC
TGCCCGTATG CGCCCGGCGC CTCGGGCAAC GTGGTCACCG AAGACCTGGT CTTCATGTTC
GAGGCCATGG GCATCCGCAC CGGCGTGGAC ATCGATCGCC TGATCGCCGC CCGCCAGCCG
CTGGCCGCAG GCCTGCCCGG CGAGGAGCTG CACGGCATGA CGCCGCTGGC CGGCCTGCCC
AAGGGCTTTG TGCCCCGCAT CTACGCACCG GCCTGA
 
Protein sequence
MSTGESATID THHRMQLPMS SHRFDVLISE VGPRDGLQSV ASTMSTAHKL AWIAALAHAG 
LQEIEVGSFV SPKLLPQMAD AAEVVAQAIT LPGVTVMALA PNLRGAEAAL RAGAHKVTLP
VSASPAHSMA NVRKTPMQMV DEVRAIAALR DEIAPQALIE AGISTAFGCT LQGLVPEDEV
IALALACVAA GADESGLSDT TGMANPAQVR RLFTRLRAEL GEHAGAAHMH NTRGLGLANC
LAAYEAGVRT FDASLAGLGG CPYAPGASGN VVTEDLVFMF EAMGIRTGVD IDRLIAARQP
LAAGLPGEEL HGMTPLAGLP KGFVPRIYAP A