Gene Daci_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2965 
Symbol 
ID5748549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3267093 
End bp3268154 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content70% 
IMG OID641298068 
Producthypothetical protein 
Protein accessionYP_001563988 
Protein GI160898406 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.139568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGCCA TCCACCGCAA CCCGGCCGCC CAAAAACAGA TACAGACACT GACACAGACC 
CAGGCCCGCC CTTGTTCCAC CCCGCGCCGC CAGTTGCTGC TGTGCGCCCT GCCCGCATTG
GCTGCCGCCC TGCTCCCGCT GGCGGCCCAG GCACAGCCTG ACCACTGGCC CTCACGCGCC
GTGCGCATGG TCGTGCCCTA CACGCCGGGC GGCGGCACGG ACGCGGTCGC GCGCCAGATC
AGCGAGCGCG TGGGTACGCT GAACAAATGG ACCGTGGTCG TGGACAACAA GCCCGGCGCG
GGCGGCAACA TCGGCCTGGA TGCAGTGGCC AAGTCCGCGC CGGATGGCTA TACCTTCGGC
ATGGGCCAGA CCGCCAACCT CGCCATCAAC CCCGCCCTGC TGCCCAGCAT GCCCTTCAAC
CCGCGCACCG ACCTGATCCC CGTGGCCCTG GTCGCTGCCC AGCCCACGGT GCTGGTCGTG
CCGCAGGACT CGCCATGGAA GTCGGTGCAG GACCTGGTCA AGGCCGCCAA GGCCGACCCG
GGCGGCATCC GCCAGGGCCT GGCATCGACG GGCACGGTAG GCCACCTGGC CGGCGAGATG
CTGGCCTTCA AGGCCGGCAT CCAGGTGCTC AACGTGCCCT ACAAGGGCGC AGCGCCGGCC
GTGACCGACC TGCTGGGCAA GCAGACGCAC TACATGTTCG GCACGCCCCA GGCCGTCTAT
CCGCTGCTCA AGGGCGGCAA GCTGCGCGCC CTGGCCGTGA CATCGGCCAA GCGCCTGCCC
ATCCTGCCCG AGGTGCCCAC CGTGGCCGAG TCGGGCTATG CAGGCTTCGA GGCGGTGGAC
TGGAAGCTCA TCGTCGCGCC CAAGGGCACG CCGGCTGCCA TCGTGCAGAA GATGAACACC
GCCGTGAACG CGGCCCTGCA GCAGCCCGCC GTGCAGCAGC AACTGCAGGC CGAGGGCAGC
ACGGCCCTGG GCGGCAGCAT CCAGGATGCG GCCCAATACC TGCTCAAGGA ACAGACGGAC
TGGGCCGCGC TGATCCGCGA CGCAAAGATA CGCCTGGAGT GA
 
Protein sequence
MPAIHRNPAA QKQIQTLTQT QARPCSTPRR QLLLCALPAL AAALLPLAAQ AQPDHWPSRA 
VRMVVPYTPG GGTDAVARQI SERVGTLNKW TVVVDNKPGA GGNIGLDAVA KSAPDGYTFG
MGQTANLAIN PALLPSMPFN PRTDLIPVAL VAAQPTVLVV PQDSPWKSVQ DLVKAAKADP
GGIRQGLAST GTVGHLAGEM LAFKAGIQVL NVPYKGAAPA VTDLLGKQTH YMFGTPQAVY
PLLKGGKLRA LAVTSAKRLP ILPEVPTVAE SGYAGFEAVD WKLIVAPKGT PAAIVQKMNT
AVNAALQQPA VQQQLQAEGS TALGGSIQDA AQYLLKEQTD WAALIRDAKI RLE