| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2964 |
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| Symbol | |
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| ID | 5748548 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3264381 |
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| End bp | 3266996 |
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| Gene Length | 2616 bp |
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| Protein Length | 871 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641298067 |
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| Product | lysine decarboxylase |
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| Protein accession | YP_001563987 |
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| Protein GI | 160898405 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.10226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTTC GCTTTCCCAT CGTCATCATC GACGAGGACT ACCGCTCCGA GAACACCTCG
GGCCTGGGCA TCCGCGCCCT GGCCCAGGCC ATCGAGGAGG AAGGTTTCGA GGTGCTGGGC
GTGACCAGCT ACGGCGACCT GTCGCAATTC GCGCAGCAGC AAAGCCGGGC CAGTGCCTTC
ATTCTGTCCA TCGATGACGA GGAGTTCTCG CTGGGCGATG GCGGAACCGA TCCCGTGATC
CACAGCCTGC GCAGCTTCAT CGGCGAAGTG CGCCGCAAGA ACGCCGATGT GCCGATCTAC
ATCTACGGCG AGACCAAGAC CAGCCGCCAC CTGCCCAACG ACATCCTGCG CGAGCTGCAC
GGCTTCATCC ACATGTTCGA GGACACGCCG GAGTTCGTGG CCAAGCACAT CATCCGCGAA
GCCAAGAGCT ACCTGGAAGG CGTGCAGCCG CCGTTCTTCA AGGCGCTGCT GGACTATGCG
GAAGACGGCT CCTACAGCTG GCACTGCCCC GGACACTCGG GCGGCGTGGC CTTCCTGAAA
AGCCCCGTGG GCCAGATGTA CCACCAGTTC TACGGCGAGA ACATGCTGCG CGCCGACGTG
TGCAACGCGG TGGAGGAGCT GGGCCAGCTG CTGGACCACA ACGGCGCCAT CGGCGAGAGC
GAGCGCAATG CCGCCCGCAT CTTCAATGCC GACCATTGCT ACTTCGTGAC CAACGGCACG
TCCACGTCGA ACAAGATCGT CTGGCACCAC GCCGTGGCGC CCGGCGACGT GGTCGTTGTG
GACCGCAACT GCCACAAGTC CATCCTGCAC TCCATCATCA TGACGGGTGC GATTCCGGTG
TTCCTCAAGC CCACGCGCAA CCACTTCGGC ATCATCGGCC CGATCCCGCA AAGCGAGTTC
TCGGTGGAGT CCATCCAGGC CAAGATCGCG GCCAATCCGC TGCTCAAGGG CGTGGATGCC
AAGACGGTCA AGCCGCGCGT GCTGACGCTG ACGCAGTCCA CCTACGACGG CGTGCTCTAC
AACACCGAGA CCATCAAGAG CATGCTGGAC GGCTATGTGG CCAACCTGCA CTTCGATGAG
GCCTGGCTGC CGCACGCGGC CTTCCACCCG TTCTATGGCA GCTACCACGC CATGGGCAAG
AAGCGCGCGC GCCCCAAGCA CTCGGTGGTG TATGCCACGC AGTCCATCCA CAAGCTGCTG
GCCGGCATCA GCCAGGCCTC GCATGTGCTG GTGCAGGACA GCCAGACCGA AAAGCTGGAC
CACCACCTGT TCAACGAGGC GTACCTGATG CACACCTCGA CCAGCCCGCA GTACAGCATC
ATCGCCAGCT GCGACGTGGC CGCCGCGATG ATGGAGCCGC CCGGTGGCAC GGCCCTGGTG
GAGGAGTCCA TTCTGGAGGC GCTGGACTTC CGCCGCGCCA TGCGCAAGGT GGAGGACGAG
TTCGGCGACG ACGACTGGTG GTTCGAGGTC TGGGGTCCCG AGAAGCTGGC CGATGAAGGC
GTGGGCTCGG CCCAGGACTG GATCATCCGC GGCCATGACG CGGCGCCCAA GCGCTCCAAG
GCCAAGAACG GCAAGGAGTT CGACAACTGG CACGGCTTCG GCGAGCTGGC CGACGGCTTC
AACATGCTGG ACCCGATCAA GTCCACCATC GTGACGCCGG GCCTGGACCT GGACGGCGAT
TTCTCGGACA CGGGCATCCC TGCCTCCATC GTGACCAAGT ACCTGGCCGA GCACGGCGTG
GTGGTGGAGA AGACGGGCCT GTACTCGTTC TTCATCATGT TCACCATCGG CATCACCAAG
GGCCGCTGGA ACACCATGCT GACGGCGCTG CAGCAGTTCA AGGACGACTA CGACCGCAAC
CAGCCGCTGG CGCGCATCCT GCCCGAGTTC TGCCAGCAGC ACCGCCGCTA CGAGCGCATG
GGCCTGCGCG ACCTGTGCCA GCACGTGCAC CAGCTGTACG CCAAGTACGA CATCGCCCGC
CTGACGACCG AGATGTACCT GTCGGACCTG CAGCCCGCCA TGAAGCCCAC CGATGCCTAC
GCCCACATCG CGCAGCGCAA GACCGAGCGC GTGGAGATCG ACCACCTGGA AGGCCGCATC
ACCGTGGGCC TGGTCACGCC GTACCCGCCC GGCATTCCGC TGCTGATTCC CGGCGAAGTG
TTCAACCGCA AGATCGTGGA CTACCTGCTG TTTGCGCGCG AGTTCGCCAA GGAGTGCCCA
GGCTTCGAGA CCGACATCCA CGGCCTGGTG GAACTGCAAG GCGAAGATGG CGAAGTGCGC
TACTACGCCG ACTGCGTGGC CGCGACCGCG CCGGCGCGCA AGACGCCGGC AGGTGGCAAG
CCTGCTGCGA AGAAGGCCGT GAAGACTGCA GCCAAGCCTG CTGCCAAGGC AGCCGCCAAG
ACAGTTGCCA AGGCAGCCGC GAAACCGGCA GCGAAACCGG CAGCCAAGCC GGCCGCCAAG
GTTGCCAAGG CCGCCGCGGT CAAGGCGCCT GCCAAGCGCC CCGCAGCGCG CAAGGCGCAG
CCGGCCGCGC CTGAAGTCGG CACGGCAGCC AAGCCTGCGC GCGGCCGCAA GATGGTGCAG
GTGGGGGACG ATGGTCCCTT CGGCCGCACG ATCTGA
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| Protein sequence | MKFRFPIVII DEDYRSENTS GLGIRALAQA IEEEGFEVLG VTSYGDLSQF AQQQSRASAF
ILSIDDEEFS LGDGGTDPVI HSLRSFIGEV RRKNADVPIY IYGETKTSRH LPNDILRELH
GFIHMFEDTP EFVAKHIIRE AKSYLEGVQP PFFKALLDYA EDGSYSWHCP GHSGGVAFLK
SPVGQMYHQF YGENMLRADV CNAVEELGQL LDHNGAIGES ERNAARIFNA DHCYFVTNGT
STSNKIVWHH AVAPGDVVVV DRNCHKSILH SIIMTGAIPV FLKPTRNHFG IIGPIPQSEF
SVESIQAKIA ANPLLKGVDA KTVKPRVLTL TQSTYDGVLY NTETIKSMLD GYVANLHFDE
AWLPHAAFHP FYGSYHAMGK KRARPKHSVV YATQSIHKLL AGISQASHVL VQDSQTEKLD
HHLFNEAYLM HTSTSPQYSI IASCDVAAAM MEPPGGTALV EESILEALDF RRAMRKVEDE
FGDDDWWFEV WGPEKLADEG VGSAQDWIIR GHDAAPKRSK AKNGKEFDNW HGFGELADGF
NMLDPIKSTI VTPGLDLDGD FSDTGIPASI VTKYLAEHGV VVEKTGLYSF FIMFTIGITK
GRWNTMLTAL QQFKDDYDRN QPLARILPEF CQQHRRYERM GLRDLCQHVH QLYAKYDIAR
LTTEMYLSDL QPAMKPTDAY AHIAQRKTER VEIDHLEGRI TVGLVTPYPP GIPLLIPGEV
FNRKIVDYLL FAREFAKECP GFETDIHGLV ELQGEDGEVR YYADCVAATA PARKTPAGGK
PAAKKAVKTA AKPAAKAAAK TVAKAAAKPA AKPAAKPAAK VAKAAAVKAP AKRPAARKAQ
PAAPEVGTAA KPARGRKMVQ VGDDGPFGRT I
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