Gene Daci_2958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2958 
Symbol 
ID5748541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3258000 
End bp3259802 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content67% 
IMG OID641298060 
Productflavin-containing monooxygenase, putative 
Protein accessionYP_001563981 
Protein GI160898399 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATA CGACGCCCAA CGCCCGCGCC AAGGCGCTGC TTGACCAACT CAACCATGCC 
CTGGGAGACC GCGACTTCGC GGCCGCCGGC CGCCTGTTCG CCGATGAATG CTATTGGCGC
GACCTGGTGC TGCTGACCTG GAACATCAAG ACCATGGAAG GGCGCAGCCA GATCGCCGAC
ATGCTGGCTG CGCAGCTGGA CGCCGCGGCG CCCGTGCGCT TTTCGCTGGA CGAGCGCGAG
CCGGTGGAGG AGGCCGATGG CGTGGTGTCC GCCTGGATCG TGATCGACAC GCGCCATGCG
CGCGGCGGCG GCCATGTCCG CATCAGGGAC GGGCGCATCT GGACGCTGCT GACGGCCGCC
CAGGAGCTCA AGGGCCATGA GGAGCCCATG GGCACGCGCC GCCCTATGGG GGCCGAGCAC
GGCATCCGGC GTGGCCGCCA GACCTGGCTG GAGCGCCGCC AGCAGGAGGC GCAGGAGCTG
GGCCGTGACA AGCAGCCTTT CGTGCTCGTC ATCGGCGGCG GCCAGGGCGG CATTGCGCTG
GGCGCGCGGC TGCGCCAGCT GGGGGTATCG CACATCGTCA TCGACCGCCA GGCGCGCCCC
GGCGACCAGT GGCGCAACCG CTATAAATCG CTGTGCCTGC ACGACCCGGT CTGGTACGAC
CACCTGCCGT ACATGCCTTT CCCGGACAAC TGGCCCGTGT TCGCGCCCAA GGACAAGATC
GGCGACTGGC TGGAGATGTA CACCAAGGTG ATGGAGGTGA ACTACTGGCC CTCCACCGAT
TGCCTGAACG CCCGCTTCGA TGAGGACAGG CAGGAATGGG AAGTGACCGT GGAGCGAAAC
GGCGAGACGC AGGTGCTGCG CCCCAAGCAT GTGGTGTTCG CCACCGGCAT GTCGGGCAAG
GCGAATGTGC CCAAGATCAA GGGCCAGGAC GTCTTCAAGG GCGAGCAGCA GCACTCGTCC
CAGCACCATG GCCCGGATGC CTATGCGGGC AAGAAGGTGG TGGTGATCGG CGCCAACAAT
TCAGCGCACG ACATCTGCGC GGCCCTTTGG GAGCACGGCG CCGATGTGAC CATGGTGCAG
CGCTCGTCCA CGCACATCGT GCGCTCCGAT TCGCTGATGG ACATCGGCCT GGGCGACCTG
TATTCGGAGC GCGCCGTGGC CAGCGGCGTG ACGACCAGGA AGGCGGACCT GATCTTCGCC
TCGCTGCCCT ACCGCATCAT GGCCGACTTC CAGGTGCCGG TGTACGACCG CATCCGCGAG
CGCGACGCGG ACTTCTACCG CCAGCTGGAG GCGACCGGCT TCATGCTGGA CTTCGGTGAT
GACGACTCCG GCCTTTTCAT GAAGTACCTG CGCCGCGCCT CGGGCTACTA CATCGACGTG
GGGGCCTGCG ATCTGGTGAT CGACGGCAGC ATCAAGCTGC AGGCGGGCAA GCAGATCAGC
CACCTGTCGG AAAACGCGGT GGTGCTGGCC GATGGCACCG AACTGCCGGC GGACCTGGTG
GTCTACGCCA CGGGCTATGG CTCCATGAAC GGCTGGGTGG CCGACCTGAT CAGCCAGGAG
GTGGCAGACA AGGTGGGCAA GGTCTGGGGC CTGGGCTCGG ACACCACCAA GGACCCGGGA
CCGTGGGAGG GCGAGCAGCG CAACATGTGG AAGCCCACGC AGCAAGAGGC GCTGTGGTTC
CACGGCGGCA ACCTGCACCA GTCGCGCCAC TACTCGCTGT ACCTGGCGCT GCAGCTCAAG
GCGCGGCAGG AAGGCCTGCC AGTGCGTGTC TATGACCTGC AGCAAGTTCA TCACCTGCGG
TAA
 
Protein sequence
MTDTTPNARA KALLDQLNHA LGDRDFAAAG RLFADECYWR DLVLLTWNIK TMEGRSQIAD 
MLAAQLDAAA PVRFSLDERE PVEEADGVVS AWIVIDTRHA RGGGHVRIRD GRIWTLLTAA
QELKGHEEPM GTRRPMGAEH GIRRGRQTWL ERRQQEAQEL GRDKQPFVLV IGGGQGGIAL
GARLRQLGVS HIVIDRQARP GDQWRNRYKS LCLHDPVWYD HLPYMPFPDN WPVFAPKDKI
GDWLEMYTKV MEVNYWPSTD CLNARFDEDR QEWEVTVERN GETQVLRPKH VVFATGMSGK
ANVPKIKGQD VFKGEQQHSS QHHGPDAYAG KKVVVIGANN SAHDICAALW EHGADVTMVQ
RSSTHIVRSD SLMDIGLGDL YSERAVASGV TTRKADLIFA SLPYRIMADF QVPVYDRIRE
RDADFYRQLE ATGFMLDFGD DDSGLFMKYL RRASGYYIDV GACDLVIDGS IKLQAGKQIS
HLSENAVVLA DGTELPADLV VYATGYGSMN GWVADLISQE VADKVGKVWG LGSDTTKDPG
PWEGEQRNMW KPTQQEALWF HGGNLHQSRH YSLYLALQLK ARQEGLPVRV YDLQQVHHLR