| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2957 |
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| Symbol | |
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| ID | 5748540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3255730 |
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| End bp | 3257751 |
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| Gene Length | 2022 bp |
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| Protein Length | 673 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641298059 |
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| Product | Fis family GAF modulated sigma54 specific transcriptional regulator |
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| Protein accession | YP_001563980 |
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| Protein GI | 160898398 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.41537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGATTGGCG CTGCGCCGTG CAGGGCACAG AATCGTCTGC GGCACGTTCA AAGCCCGCAT
CGACTCCACG CCATGCCCCT GCAGTCCTAC GCCTCGCACA TCCAGGAAAT CGAAGCCTTT
GGCCTCGGCT ACTCCAACCG CGGCCAAGAG CGCGACCGCG CCGTGCTGCG CAGCTGGCGC
CGCTGCATCG ACTCCCACCG GCTTGACCCG GCGCATACCA GCGAAGCCCA CATCGTGACC
GACGGCCAGC TGCGCGCGCA CCGCGAGGAG TCCGAGCCGC TGATCCACAT CGCCCGCCAT
GCGCTGGAGC GGCTGTACCA GCAGCTCAAG GGCCTGGACT ACGTGCTGCT ACTGGCGGAC
CGGCACGGCG TGGCCGTGGA CTTCCTCGGG CACGAGGCCG ACGCTGGCGA CCTGCGCCGC
GCAGGCCTGT ACCTGGGCGC GCAGTGGCGC GAGGACCACT CGGGCACCTC GGCCGTGGGC
GCCTGCCTGG AAACGGGCGA GGCGCTGACC GTGCACCAGA GCGACCATTT CGACTTCACC
CACACCGGCT TGTCCTGCAC GGCCGCGCCC ATCTACGACA TGCACGGCGA ACTCGCTGCG
GTGCTGGACC TGTCGCTGCT GCGCTCGCCC GCCGAGCGGG CCAGCCAGAA CCTGGCGCTG
AACCTCGTCG TGGCCGCCGC GCGGCGCGTG GAGCAGGCCA ACCTGATGGC GCAGTCCGGC
CAGGACTGGG TGGTGCGCCT GGCACAGTCG CCCGATTTCC TCGACGTCGA TCCCGACGCC
TCCATCAGCG TGGACGCACG GGGCCGCATC CGCGCCATGA CCCACGCGGG CGCCCGCCTG
CTGGTGGCCG CCGCGCAGCT GGACTGGCGC CAGCGCCACA AGCTCATCGG CCAGCCGCTG
GAGCGCTTCT TCGACGTGGA CCTGCGCCAC CTGCCCGAGC TGCGCCGCCA TCGCCCGGCG
CAGGAGCGCA TCATCCGCGC CCGCGACGGC AGCATCCTCT TCGCCCATGC CATGGAGCCG
CAGCGCCCGA CACGCCGCCT GCGCGCGCAG GCCATGCCGG CGCAGCCCCC GCTGCCGGCA
GCGCTGCAGG CGCTGGACAC GGGCGATGCC AAGCTGCAGA CGCTGCTGCG CAAGGCCGCA
CGGCTCGCGC CGCAAACGCT GCCCATCCTG GTGCAGGGTG AGACCGGCGC AGGCAAGGAA
TACCTGGCCC GCGCGCTGCA TGCCAGCAGC GGCCGCAGCG GCGCCTTCGT CGCCATCAAC
TGCGCGGCCA TTCCCGAGGC ACTGCTGGAA AGCGAGCTGT TCGGCTACCT GCCCGGCACC
TGGACCGGCG GCGCCAGCAA GGGCCGCGAG GGCCTGATCG CCGCGGCGCA CGAAGGCACG
CTGTTCCTCG ACGAGATCGG CGATATGCCA CTGGCCCTGC AAGCCAAGCT GCTGCGTGTC
CTGTCCGAAT CCGAAATCAC CCCGCTGGGC GCCCGCGCGC CACGGGCGGT GTCCGTTCGC
GTCATCTCGG CCTCACACCG GCCGCTGGCC GAATTGGTGC GGCGCGGCAG CTTCCGCGAA
GACCTGCTTT ACCGCCTCAA TGCCGCCGAG CTGCAACTGC CCGCCCTGCG CCAGCGCAGC
GACCTGCAGG CGATTGCCGA CCAGATGCTC GCCACGCTGG GCAGCCATCT GCACCTGGGC
GACGCGGCCC GCGCGTTGCT GGCCGCGCAC GCATGGCCCG GCAACCTGCG CGAGCTGCAC
AACGCGCTGC GCTACGCCGC AGCCCTGTGC GGGAACGATG GCGACGGCAG CATCGAGCCC
GACCACCTGC CCGACGCGCT GCACAATGCC CCGCCCTGCA CCGCCGCCCT GGCCAGCAAC
ACCAGCGAGC CCGCCGCACA GGCGCTGGAG CAAATGCTGG CCCAATGCCA GGGCAACGTC
TCCGAGGCGG CGCGCCAGCT CGGCGTCAGC CGCTCCACCA TCCACCGCCG CATCCAGCAG
CTGCAGCTTG GCGTGCGGCA TGCCCAATGG CGCGGGCCAT AG
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| Protein sequence | MIGAAPCRAQ NRLRHVQSPH RLHAMPLQSY ASHIQEIEAF GLGYSNRGQE RDRAVLRSWR
RCIDSHRLDP AHTSEAHIVT DGQLRAHREE SEPLIHIARH ALERLYQQLK GLDYVLLLAD
RHGVAVDFLG HEADAGDLRR AGLYLGAQWR EDHSGTSAVG ACLETGEALT VHQSDHFDFT
HTGLSCTAAP IYDMHGELAA VLDLSLLRSP AERASQNLAL NLVVAAARRV EQANLMAQSG
QDWVVRLAQS PDFLDVDPDA SISVDARGRI RAMTHAGARL LVAAAQLDWR QRHKLIGQPL
ERFFDVDLRH LPELRRHRPA QERIIRARDG SILFAHAMEP QRPTRRLRAQ AMPAQPPLPA
ALQALDTGDA KLQTLLRKAA RLAPQTLPIL VQGETGAGKE YLARALHASS GRSGAFVAIN
CAAIPEALLE SELFGYLPGT WTGGASKGRE GLIAAAHEGT LFLDEIGDMP LALQAKLLRV
LSESEITPLG ARAPRAVSVR VISASHRPLA ELVRRGSFRE DLLYRLNAAE LQLPALRQRS
DLQAIADQML ATLGSHLHLG DAARALLAAH AWPGNLRELH NALRYAAALC GNDGDGSIEP
DHLPDALHNA PPCTAALASN TSEPAAQALE QMLAQCQGNV SEAARQLGVS RSTIHRRIQQ
LQLGVRHAQW RGP
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