| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2956 |
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| Symbol | |
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| ID | 5748539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3253119 |
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| End bp | 3255071 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641298058 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001563979 |
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| Protein GI | 160898397 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.753222 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACCT CGAATGGTCT GGCGTCGGCC TCTCCTGGCT CCGACGCTCT CTTGCCCCTT
GACCCGGGCC ACGCCGTTCT GGATGCGTTT CCCGACGCCG TCTTTGTCGT CGGGCTCGAC
GGCCGCCTGG CCCACTGCAA CCGCCAGGCC CGCAGCCTGC TGGACCACTC CGGAGATGCG
CTGGAGGGCA GTGTTTTCGA AGAGCGTTTC GTGGCCCAGG CTGCGCGCTC AGGCTGGGCA
AGCCGCCAAT GGGAGCCTGC CCAGGCCGCA CAGCCCCGGC AGTCCAGTTG CTGGCCGCTG
CTGACCTGTT CAGGGCGCGA GCGGCCCGTG GCTTCGAGCA CATCGCGCAT ACGGCTGCCG
GACGGCAGCC CGGCGTTGCT GCTGTGCGTG CGCGAGGCCG ATGCGCACTC GCCTGCAACG
CCGCCGTTCG CGCCGCCTGC CGCGCCCCCG CCCCTGTCCA GCCCGCTTTC CAGCGCAGAG
CGCAGCTTTG CCTTGCTGGT GCAAAGCGTG ACCGACTATG CGATCTACAT GCTCGACCCC
GAAGGCCGCA TCGTGAGCTG GAACCTGGGC GCCAAGCGCA TCAAGGGCTA TGAGGAGGAG
GAGGTCCTCA ACACCCATTT CTCGCGCTTT TACACGCCCG AAGACCAGCA GGCCGGGCTG
CCCCAGGCGG GGCTGCGCAC GGCGGTCAGC ACGGGCCGCA TGGAGGCCGA AGGCCTGCGC
GTGCGCAAGG ATGGCTCGCG CTTTTGGGCC TCGGTGGTCA TCGATGCCAT CTACGATGAG
GGCCGGCTGA TCGGCTTTGC CAAGGTCACC CGCGATGTGA CCGAGCGCAA GGCCGCCGAA
TCCCAGCTGC GCCAGGCCTT GAAGATGGAG GCCATCGGCC GCTTCACGGG CGGCGTGGCC
CATGACTTCA ACAACCTGCT GATGGCCGTG CTCAGCAGCC TGGAGCTGCT GCGCAAGCGC
ATGCCGCCCG ACGAGCGGCT GCGCGCGCTG GTGGAGACCG CCACGCGCGG CGCCCAGCGT
GGCGCCTCGC TGACCCAGCG CATGATGGCC TTTGCGCGGC AGCAGGAATT GAAGACGCAG
GCGGTGGATG TGGCGGTGCT GCTGTCGGGC CTGCAAGGCC TGCTGCAGCA GGCGGCCGGC
CCGCATATCT TTCTCAAGAT GGCCCTGGCC GCCAACCTGC CGCGCATCCT CACCGACCCC
AGCCAGTTCG AGAGCAGCAT GCTCAACCTC GTCGCCAACT CGCGCGACGC CATGCCGGGC
GGCGGCGTCA TCAAGATCGC GGCGGCCGTG GAAACGACGC TGCCGCGCCA GCTTGCAGGC
CTTGCCGCAG GCTCGTATGT CTGCGTGCGC GTGGAGGACA CCGGCGAGGG CATGGACGAG
CAGACGCTGT CCCGCGTGGT CGAGCCCTTC TTCACCACCA AGGGCGTGGG CAAGGGCACC
GGCCTGGGCC TGGCCATGGT GGACGGGCTG GTGGCCCAAT CCGGCGGCAA GCTCGTGCTG
CACAGCACAC CGGGCAACGG CACCACGGTG GAGATGTGGA TGCCCATCTC CAAGGACGAG
AGCACGGCCT GCCACCTGGG CGCCCGGCGC ACGCAGGACG TGGGACCCAT GGACGTGCTG
CTGGTGGACG ACGACCCGCT GGTACTGGCC AACGCCTCGG CCCTGCTGGA GGACCTGGGC
CACCGTGTCA CGGCCCTCGG CGCCGGGCAG GAGGCCATCG ACCTGCTGGC GCGCAAGGCA
CGCTTTGACG TGGTCATCTC CGACTACGCC ATGCCCGGCA TGAATGGCGT CGAGCTGGCC
GAACACATTG CGCAGCGGTA TCCAGGCTTG AATTTCATCC TGGCCAGCGG CTTTGCAGAC
ATCCCGGCGC TGCCGCCTGG AATGACGCGG CTGGCCAAGC CGTATTCGCA GGAGGATCTG
AGCCAGTTGC TGCATCAGTT GATGAGGGCG TGA
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| Protein sequence | MLTSNGLASA SPGSDALLPL DPGHAVLDAF PDAVFVVGLD GRLAHCNRQA RSLLDHSGDA
LEGSVFEERF VAQAARSGWA SRQWEPAQAA QPRQSSCWPL LTCSGRERPV ASSTSRIRLP
DGSPALLLCV READAHSPAT PPFAPPAAPP PLSSPLSSAE RSFALLVQSV TDYAIYMLDP
EGRIVSWNLG AKRIKGYEEE EVLNTHFSRF YTPEDQQAGL PQAGLRTAVS TGRMEAEGLR
VRKDGSRFWA SVVIDAIYDE GRLIGFAKVT RDVTERKAAE SQLRQALKME AIGRFTGGVA
HDFNNLLMAV LSSLELLRKR MPPDERLRAL VETATRGAQR GASLTQRMMA FARQQELKTQ
AVDVAVLLSG LQGLLQQAAG PHIFLKMALA ANLPRILTDP SQFESSMLNL VANSRDAMPG
GGVIKIAAAV ETTLPRQLAG LAAGSYVCVR VEDTGEGMDE QTLSRVVEPF FTTKGVGKGT
GLGLAMVDGL VAQSGGKLVL HSTPGNGTTV EMWMPISKDE STACHLGARR TQDVGPMDVL
LVDDDPLVLA NASALLEDLG HRVTALGAGQ EAIDLLARKA RFDVVISDYA MPGMNGVELA
EHIAQRYPGL NFILASGFAD IPALPPGMTR LAKPYSQEDL SQLLHQLMRA
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