| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2953 |
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| Symbol | |
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| ID | 5748536 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3249803 |
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| End bp | 3252181 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641298055 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001563976 |
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| Protein GI | 160898394 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCTT CCCCTACCGT CACCGGCCTG CCGCGCCTTC GCATCGCGGC CGTGGCCGCC
GCACTGTGCA TTGCCGGCCT GGCCCATGCC CAGCCCCTTG CCGTGGACCT GCCTGCCCAG
CCGCTGGCCC AGTCGCTGAA CGCGCTGGCG CGCCAAAGCG GCGCCCAGAT CATCTTCCTC
ACCGATGTGG CCCAGGGCCT GCAGGCGCCC GCGCTGCGCG GCACGCTGGA AGTGCGCGAG
GCCCTGCAGC GCCTGCTGGC CGGCAGCGGC CTGCAGGTGC GTGCGCAGGA TGAGCGCACC
TTCACCGTGG AGCGCAGCGG CGGCCCGGCT GCCAGCTCCG GCGCTGGGGG CGCCGTCATG
GCAGAAGTGC GCGTGCTGGC CTCGCGCGCG GAGGACACGG CCTACTACGC CCCCTCGGCC
GCCAGCGGCA CCAAGACCGA GGCGCCGCTG CGCGACGTGC CCCAGACCAT CAATGTGATC
CCCCAGCAGG TCATGCGCGA CCAGGCCGCC ACCTCGCTGC AGGACACGCT GCGCAACGTG
GCCGGCATCG GCCTTTCGCA CGGCGACGGC CAGCGCGACC AGGTCAGCAT CCGCGGCTTC
ACCAGCATCG GCGACCAGTT CGTGGATGGC TTTCGCGACG ATGCGCTGTA TTTCCGCGAC
CTCTCCAACA TCGAGCGCGT GGAAGTCGTC AAGGGCCCGG CCGCCGTGCT CTATGGCCGG
GGTTCCTCGG GCGGCCTGGT CAACCGCGTG ACCAAGAAGC CGGGCGTCAA TGTCTCCGAC
GTGGCCGTCA GCGTGGGAAG CTGGGCCGAC AAGCGTGCCG AATTCGATGT AGGCCGTGCG
CCAGAGGGCA GCGACTGGTC CTGGCGCGTC ACCGGCGCCG CCGAAGACGC CAACAGCTAC
CGCAGCCAGC AGTTCCTCAA GCGCGAGACC ATCGCCCCCT CCGTCATGTG GAAGCCGGAC
GGCAACACCT CGCTGACGCT GCAGGCCGAG CTGCTGCGCG ACAAGCGCGT CACCGACTTC
GGCATTCCCG CCTATCGCGG CCGCCCCGTG GATGTGGCGC CCGGCACCTA CTACGGCTCG
GCCAATGCGC GCGATGCGGA CACCTCCGAA TCCACCGTGG GCTCCTTCAC CGCCACCTTC
AACCACCGCT TCTCGGACAC GCTGCGCGTG CGCAACGCGC TGCGCTACTA CCACTACGAG
CTGGACCGCC AGAACACCTT GCCGGCCGGC ACCACCAACG AGGCGGCCGG CACCGTGGCG
CTGACCCGCT CGGGCGTGGA CCGCAACGAG CACGGCATCT TCAACCAGAC CGAGCTGATC
CAGAACTTGC GCACCGGCAG CGTGCAGCAT GAAGTGCTCT ACGGCGTGGA GCTGGGCCAG
CAGAACAAGG ATGCGCTGTC CTTCAGCGGC GGCACCCTGG CCAATGTGAA CCTCTGGAAC
CCCGTGCTGC CCGTGGCCCC GCTCAACGGC GGCGGCACCC TGAGCGGCAG CACACTCAAC
CGCTACCTCA CGCGGGCCCT GTACCTGCAG GACCAGGTCA CGCTGTCGCC GCAGTGGAAG
CTGCTGGTGG GCCTGCGCTA TGACCGCTTC GGCCAGGAAA CCGACAACCG CCTGGCCGGC
CAGAGCGACT TCAGCCGCAC GGACTCCACC TGGAGCCCGC GCGCCGGCCT GGTGTGGCAG
CCCGATGCCG TGCAGTCCTA TTACCTGTCG GTCAGCCGCT CCTACCAGCC TTCGGCCGAG
ATGTTTGCGC TGTCGGCCAC CAATGCCGCC ATCAAGCCGG AAAGCACCAC CAACTATGAA
GTGGGCGGCA AATGGGACCT GATGGACGGC AAGGCCATGG CGACGGCATC GCTGTTCCAG
CTGGAACGCA CCGACATCAA GACCACCAAC CCGGCCCAGC CCACCCAGCT GATTCCCATC
GGCACGCAGC GCACGCGCGG CCTGGAGCTG TCGCTGTCCG GCGAACTGCG CCCCGGCACC
CAGGCCACCT TCAGCTACGC CTACCTGGAT GCCGTGGTCA CCGAATCCAC CACCGTGGAC
GCCGGCCAGC CTGTGCAGGG CAAGCGCGCC ACCATCACGC CCAGGAACTC CCTGTCTGTC
TGGCTCACCC AGCGCCTGGG CGATGCCTGG ACCGTGGGCG GCGGCCTCAA CTACGTGGGC
GACCGCTTTG CCAACCCCGG CAACACCGTC ACGCTGCCCG CCTACACGGT GGTGGATGCC
ATGGCCCAGT ACCGCATCGG CCGTGCCACC ACGGTGCAGC TGAACCTGCG CAACCTGTTC
GACCGCCGCT ATATCGTCTC GGCCCACGGC ACCAGCCCCA ACCTGAACCT GCCGGGTGCG
CCGCGCAATG TGATGGTGAC GCTGCGGCAC AGCTTCTGA
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| Protein sequence | MNPSPTVTGL PRLRIAAVAA ALCIAGLAHA QPLAVDLPAQ PLAQSLNALA RQSGAQIIFL
TDVAQGLQAP ALRGTLEVRE ALQRLLAGSG LQVRAQDERT FTVERSGGPA ASSGAGGAVM
AEVRVLASRA EDTAYYAPSA ASGTKTEAPL RDVPQTINVI PQQVMRDQAA TSLQDTLRNV
AGIGLSHGDG QRDQVSIRGF TSIGDQFVDG FRDDALYFRD LSNIERVEVV KGPAAVLYGR
GSSGGLVNRV TKKPGVNVSD VAVSVGSWAD KRAEFDVGRA PEGSDWSWRV TGAAEDANSY
RSQQFLKRET IAPSVMWKPD GNTSLTLQAE LLRDKRVTDF GIPAYRGRPV DVAPGTYYGS
ANARDADTSE STVGSFTATF NHRFSDTLRV RNALRYYHYE LDRQNTLPAG TTNEAAGTVA
LTRSGVDRNE HGIFNQTELI QNLRTGSVQH EVLYGVELGQ QNKDALSFSG GTLANVNLWN
PVLPVAPLNG GGTLSGSTLN RYLTRALYLQ DQVTLSPQWK LLVGLRYDRF GQETDNRLAG
QSDFSRTDST WSPRAGLVWQ PDAVQSYYLS VSRSYQPSAE MFALSATNAA IKPESTTNYE
VGGKWDLMDG KAMATASLFQ LERTDIKTTN PAQPTQLIPI GTQRTRGLEL SLSGELRPGT
QATFSYAYLD AVVTESTTVD AGQPVQGKRA TITPRNSLSV WLTQRLGDAW TVGGGLNYVG
DRFANPGNTV TLPAYTVVDA MAQYRIGRAT TVQLNLRNLF DRRYIVSAHG TSPNLNLPGA
PRNVMVTLRH SF
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