Gene Daci_2935 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2935 
Symbol 
ID5748517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3224600 
End bp3225745 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content67% 
IMG OID641298036 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001563958 
Protein GI160898376 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.527981 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCC GCTCCGTATT GCGTGAAGAC CACCTGCTGT TCAAGGAACA GGTGGACCGA 
TTCGTGGCCA CCGAGATCCT GCCCCACATC AATGACTGGG AGGCAGAGGG CATCACGCCG
CGCGCCCTGT GGCGCAAGGC CGGCGACAGC GGCCTGCTCA ACTGCGACCT GCCCCCGCCC
TACGGCCAGG GCGGCGACTT CGGCCACGCG GCCGTGGTCA TCGAGGCGCT GGCGCGCGCC
AACTGCCTGG GCATCGGCTT TTCCATCCAT TCCGACATGG TGGCGCCCTA TCTCTGGAAC
TTCGGCACGC AGGTGCAGAA GGACCGCTGG CTGCCGCGCA TGGCCACGGG CGAGCTGATC
GGCGCCATCG CCCTGACCGA GCCCGGCGCG GGCAGCGACC TCAAGGCCGT ACGCACGCGC
GCCCGCCGCA AGAGCGAGAG TGAGGGCGGC GGCTATGTGC TCAACGGCCA GAAAACCTTC
ATCACCAATG GCGTCAACGC CGGCCTGATG GTGGTGCTGG CCAGCACCGA GCCCGACCTG
GGCGCGCGCG GCCTGTCGCT GTTCGTGGTG GAAGAAGGCA TGAAGGGCCT GGGCAAGGGA
CCGGCACTGC GCAAGATAGG CCAGCACAGC CAGGACACCT GCGAGCTGTT CTTCGACGAA
CTGCACCTGC CGGCCGACCA CCTGCTGGGC CGCGAAAACG CCGCCTTCGA GCATGTGACG
CAGGAGCTGG CGCAGGAGCG GCTGGCGATC GCGCTGCGCG CGGCAGCCTC CACCGAAGGC
ATGCTGGATG AGGCTGCCGA GTTCGTGCGC AACCGCAAGG TCTTCGGGCG CCGCGTGCTC
GACTACCAGA ACACCCGCTT CAAGTTCGCC GATGCGCTGG CCAAGACCAC CATGCTGCGC
GTCTTCCTGG ACGACTGCCT GGCCCGGCAC ATGGAAGGCT CACTGGACTC CGTCACCGCC
GCCATGGCCA AGCTCAATGC CACCGAGCTG CAGGGCCAGG TGCTGGACGA GCTGCTGCAA
TTGCACGGCG GCTACGGCTA CATGGCCGAA TACGGCATTG GCCGCGCCTG GGCCGATGCA
CGGGCGCTGC GCATCTTCGG CGGAAGCAGC GAGATCCTGC GAGAGATCAT CGGCAAGCGC
TTCTGA
 
Protein sequence
MRTRSVLRED HLLFKEQVDR FVATEILPHI NDWEAEGITP RALWRKAGDS GLLNCDLPPP 
YGQGGDFGHA AVVIEALARA NCLGIGFSIH SDMVAPYLWN FGTQVQKDRW LPRMATGELI
GAIALTEPGA GSDLKAVRTR ARRKSESEGG GYVLNGQKTF ITNGVNAGLM VVLASTEPDL
GARGLSLFVV EEGMKGLGKG PALRKIGQHS QDTCELFFDE LHLPADHLLG RENAAFEHVT
QELAQERLAI ALRAAASTEG MLDEAAEFVR NRKVFGRRVL DYQNTRFKFA DALAKTTMLR
VFLDDCLARH MEGSLDSVTA AMAKLNATEL QGQVLDELLQ LHGGYGYMAE YGIGRAWADA
RALRIFGGSS EILREIIGKR F