Gene Daci_2925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2925 
Symbol 
ID5748507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3212762 
End bp3213775 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content67% 
IMG OID641298026 
Productinositol 2-dehydrogenase 
Protein accessionYP_001563948 
Protein GI160898366 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.943398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.313132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTGC AGATCGGAGT GATTGGCTGC GGGGCCATAG GCCAGGACCA TGTCCGCAGG 
ATGTACCAGA CGCTGTCGGG CGCCCGGGTA GTGGCGGTGA CGGACATCGA TGCGCAGCAG
GTGCGTGAGG TGATGGCCCG GCACGGCCCG GACATCGAGG CCTTTGACAG CGGCCCGGCA
CTGATTGCCG CGCCGCAGGT GCAGGCGGTA CTGGTCACGT CCTGGGGACC CACGCACGAG
GAGCTGGTGC TGGCGGCCAT CGCCCAGGGC AAGCCGGTGT TCTGCGAAAA GCCGCTGGCA
GTCACCGCTG CCGGCTGCCT GCGCATCGTG CAGGCGGAGA TGGCCCATGG TCAGCGGCTG
GTGCAGGTCG GCTTCATGCG ACCCTACGAC GCAGGCTACC GGGCATTGCG GCAGGTCATC
GCCAGCGGCC AGATCGGTGC GCCGCTGATG GTGCACTGCG CGCACCGCAA TCCCTGCGTG
GCCGACGGCT ACACCACCGG CATGGCCATC ACCGATACGC TGATCCATGA GCTTGATGTG
CTGCGCTGGC TGCTGGACGA CGAATACGCC AGTGCCCAGG TGGTGTACCC GAAGAGAACG
CGCCACGCCC TGCCCCATCT GGCCGACCCG CAGATCGTTT TGCTGGAGAC CGTGGGCGGC
ATCCGCATCG ATGTGGAGGT GTTCGTCAAC TGCCGCTATG GCTACGACAT CCAGTGCGAA
GTGGTGGGCG AGACAGGCAT TGCGCGCATG CCCGACCCCG CAGCCGTCCC CCTGAAAAGC
GCGGCCATGT ACTCCATACC CATACTCACC GACTGGAAGC AGCGCTTCAT GGCAGCCTAT
GACGTGGAGC TGCAGGCCTT CATCGACGGC GTGCGCGGCC AGCGGCTGAC GGGGCCCTCG
GCCTGGGACG CCCATGCAGC CGCCGTGGCC GCCGATGCCT GCGTGCTGGC CCAGTCCTCC
GGCGCCGTAG AGCGCATGGC GGCGGCGCCC CGGCCCGCGT TCTACCAAAG CTGA
 
Protein sequence
MTLQIGVIGC GAIGQDHVRR MYQTLSGARV VAVTDIDAQQ VREVMARHGP DIEAFDSGPA 
LIAAPQVQAV LVTSWGPTHE ELVLAAIAQG KPVFCEKPLA VTAAGCLRIV QAEMAHGQRL
VQVGFMRPYD AGYRALRQVI ASGQIGAPLM VHCAHRNPCV ADGYTTGMAI TDTLIHELDV
LRWLLDDEYA SAQVVYPKRT RHALPHLADP QIVLLETVGG IRIDVEVFVN CRYGYDIQCE
VVGETGIARM PDPAAVPLKS AAMYSIPILT DWKQRFMAAY DVELQAFIDG VRGQRLTGPS
AWDAHAAAVA ADACVLAQSS GAVERMAAAP RPAFYQS