| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2922 |
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| Symbol | |
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| ID | 5748504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3207297 |
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| End bp | 3209948 |
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| Gene Length | 2652 bp |
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| Protein Length | 883 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641298023 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001563945 |
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| Protein GI | 160898363 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.301068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAAC CCGTTCGACG CCCTTCACGC CGTTCCTTCT GGACCCTGCT GCTGCTGTTC
GGCGGCATGC TCGCCTGCAT GCTGCTGGCC GGTGAGCTGG TCTACCACCG CGCCCTGCGC
GGCGAGGCCG AAAGCGTGCA GCGCCAGCTC AGCCTCTACG CCCAGGCCCT GGGCCAGCGC
ATAGACCGCT ACCGCACCCT GCCCGAGGTG CTGGCGCTGG ACGCGCAACT GCGCGCCGCC
CTCACCCACC CGCTGTCTCC CGCCGAAGTC GATGCCCTCA ACCGCAAGCT GGAGCAGGCC
AACGGCGCCA GCCAGTCGTC CACGCTGACC CTGATCGACC GCCACGGCAC GGCCCTGGCT
GCCAGCAACT GGCGCGAGAC GCGCAGCAAC GTGGGCGTGG ACTACAGCTT CAGGCCCTAT
GTGCAGCAGG CGCTGTCGCG CGGCAGCGGG CGCTTCTACG GCATCGGCCT GACCACGGGC
CTGCCGGGCT ACTTCCTGTC GCAGGCCATC CTGGACGAAC AGAACGCCGT CGCGGGCCTG
GTGGTGATCA AGATCGCGCT GCTGGAGCTG GAGCGCGAAT GGCTGCAGAC GCCCGACGTG
GTCATGGCCT CGGACGAGCA CGGCGTGGTC TTCCTGGCCA GCCAGCCCGA CTGGCGCTAC
CGCCTGCTGT CACCCCTGAG CCCCGCCGAC GAGGCGGACC TGGCCGCCAC GCGCCAGTAC
ATCGACCAGG AGCTGCACCC CATGCGCTAC CGGGTGCGCC AGGGCCTGGA GCAAGGCAGC
CGCCTGGTGC AGATGCAGGA GCCCGCCCTG CCCGGCACCA CGCTGTGGCA GACCCTGCCC
CTGCCCGGCA GCGACTGGCA GTTGCACCTG CTGCACGACA CGCAGGCCAG CACCGTGGCC
AGCCGCTGGG CGGCGGCGGC CGCTGCGGGC GGCTGGCTGG CCCTGGGCCT GCTGGTGCTG
TTCGTGCGCC AGCGCAGGCG GCTGGCCGCG CTGCGCCTGC GCAGCCGCCT GGAGCTGGAG
ACCGTGCTGC GCCAGCATGC CCAGGAGCTG CGCACGGCCC AGGACGGCAT CGTCCAGGCC
GCGCGCCAGG CCGACACGGG CCTGAGCCGC AGCCTGGAGC ACCTGCCCCA GGGCGTGGTG
GTGATCGATG CCGACCTCAA CCTGGTGGCC TGGAACTCGC GCTACGTGGA GCTGTTCCGG
TTTCCCTCCG AGCTGCTGCG CACGGGCCAG CCCATAGAGA ACCTGTTCCG CTACAACGCC
CGGCGCGGCC TGCTGGGGCC CGGCCCCATC GAAGAGGCCA TCCACCGGCG GCTGCAGCAT
CTGCGCAGCG GCAGCCCGCA CCTGCGTGAA AGCACCAAGG ACGACGGCAC GGTGCTGGAG
ATCCGCGGCA ACCCGCTGCC CGATGGCGGC TTCGTCACCA GCTACGCCGA CATCACCAGC
TACAAGAACG CCGCGCGCGA GTTGCGCTCG CTGGCCGATG CGCTGGAGCA GCGCATTGCC
GAGCGCACGC GCGACCTGGC CGAAGCCAAG CGCGAGGCCG AGCAGGCCAA CCGCTACAAG
ACCCGCTTCG TGGCCGCCGC CGTGCACGAC CTGCTGCAGC CGCTGAACGC CGCGCGCATG
TTCAGCTCCC TGCTGCGCAG CCATCTGCAT GACGACGCGG GCCGCCATGT GGCCGACAGC
ATCGACGGCG CACTGGCCGC GCAGGACGCC ATCCTGGGCA GCCTGCTGGA CATCTCGCGC
ATGGAATCGG GCCAGCTGGA GGTGCGCGTG CGCGACTTCG CGCTGGGGCC GCTGCTGCAG
GTCATGCGCC ACAACTTCGG CATCCTGGCC GAAAGCCGGG GCCTGCGCCT GAGCGCTGTG
GACACGCGCT GCGTGGTGCG CAGCGACGAG GCGCTGCTGC GCCGCATCCT GCAGAACTTC
CTGTCCAACG CCATACGCTA TACGCGCCAG GGCCGCATCG TCATCGGCTG CCGGCGCCAG
GGCCAGCAGT TGCGCATCGA GGTGCACGAC CAGGGACCGG GCATTCCCGA AAGCCTGCAG
CACGAGATCT TCGAGGAATT CCGCCGCCTG GACGAAGGCC ATGGCGACGA CCGTGGCGCG
GGGCTGGGCC TGGCCATCGT CGAGCGCCTG GGCCGCCTGC TGGGCCACGA GATCGGCCTG
CGCTCCCACC TGGGCCGGGG CAGCGTGTTC TGGGTCTGCG TGCCGCTGGG CGATCCCGCA
GCCGTGCCGC AGATCGCCGC GGCCACGCAC TCCGGCGAGG CAGGCCAGGA CGCACCGCTG
CAGGGCATGA GCGCCTGGTA CGTGGAAGAC GATGCCCAGT CCTGCACCGC CATGCGCGCC
CTGCTGCAGC GCTGGGGCTG CAACGTGCCG CTGGCCGGTG GCCCGGCCGA GGCGCTGGCG
CTGGCCGCGC CCGGCGAAGC GCCGCAGCTG GTGCTGCTCG ACGTGCGCCT GGGCCAGTTG
CACGGCCCCG ATGTCTACGC GCAGCTGTGC CAGCGCTGGG GCCAGTCGCC GCCCGTGATC
CTGGTCACGG CCGAACGCGA CGGCATGGTG CGCCGCCAGG CGGCCGAGCG CGGCTGGGGC
TTTCTGGCCA AGCCCGTGCG CCCGCCCGCG CTGCGCGCGC TCATGAGCCA GATGCTGCTG
CGCCACCGAT AG
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| Protein sequence | MPQPVRRPSR RSFWTLLLLF GGMLACMLLA GELVYHRALR GEAESVQRQL SLYAQALGQR
IDRYRTLPEV LALDAQLRAA LTHPLSPAEV DALNRKLEQA NGASQSSTLT LIDRHGTALA
ASNWRETRSN VGVDYSFRPY VQQALSRGSG RFYGIGLTTG LPGYFLSQAI LDEQNAVAGL
VVIKIALLEL EREWLQTPDV VMASDEHGVV FLASQPDWRY RLLSPLSPAD EADLAATRQY
IDQELHPMRY RVRQGLEQGS RLVQMQEPAL PGTTLWQTLP LPGSDWQLHL LHDTQASTVA
SRWAAAAAAG GWLALGLLVL FVRQRRRLAA LRLRSRLELE TVLRQHAQEL RTAQDGIVQA
ARQADTGLSR SLEHLPQGVV VIDADLNLVA WNSRYVELFR FPSELLRTGQ PIENLFRYNA
RRGLLGPGPI EEAIHRRLQH LRSGSPHLRE STKDDGTVLE IRGNPLPDGG FVTSYADITS
YKNAARELRS LADALEQRIA ERTRDLAEAK REAEQANRYK TRFVAAAVHD LLQPLNAARM
FSSLLRSHLH DDAGRHVADS IDGALAAQDA ILGSLLDISR MESGQLEVRV RDFALGPLLQ
VMRHNFGILA ESRGLRLSAV DTRCVVRSDE ALLRRILQNF LSNAIRYTRQ GRIVIGCRRQ
GQQLRIEVHD QGPGIPESLQ HEIFEEFRRL DEGHGDDRGA GLGLAIVERL GRLLGHEIGL
RSHLGRGSVF WVCVPLGDPA AVPQIAAATH SGEAGQDAPL QGMSAWYVED DAQSCTAMRA
LLQRWGCNVP LAGGPAEALA LAAPGEAPQL VLLDVRLGQL HGPDVYAQLC QRWGQSPPVI
LVTAERDGMV RRQAAERGWG FLAKPVRPPA LRALMSQMLL RHR
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