| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2920 |
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| Symbol | |
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| ID | 5748502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3205076 |
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| End bp | 3206104 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641298021 |
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| Product | porin |
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| Protein accession | YP_001563943 |
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| Protein GI | 160898361 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.281008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTT CCTTCATCGC AATGGCCGCT GCACTGGCCT GCGCCGGCGC TGCACACGCC
CAAAGCTCGG TCCAGCTGAC TGGTCTGGTG GACGCCTATG CCGGCTCCAT GCGCATGGCT
GGCGACGCCA GCGGCAAGGG TGTCGTGGGT TCGGGCGGCA TGACCACCTC CTGGTGGGGC
ATGAAGGGCC AGGAAGACCT GGGCGGCGGC CTGAAGGTCG ATTTCCAGCT GACGGTCTTC
ATGCGTGTGG ACACCGGCAG CCCCGGCCGT TTCGATGGTG ACCCGTACTT CTCGCGCGAT
GCCAACGTCG GCCTGTCCGG CGGCTTCGGC ACGGTGCGCC TGGGCCGCGG CATGGCGCCC
AACTTCCTGC CCACCATCCT GACCAACCCC TTCGGCGACT CCTTCACCAT CTCCCCGCTG
GTGCTGCACG CCAACGTGGG CACGACAGCC TGGGGCTCGG CCAACCTGAC CACGCCGTCC
GACACCGGCT GGAGCAACCA GGTCGTCTAC ACCACGCCCA AGTTCGGCGG CCTGCAGGCC
AACGTCCACT ACCAGTTCGG TGAAAAGGGC GGCGATTCCG GCAAGAAGAA CATCGGCGTG
AACGCCATGT ACTTCGGCGG CCCCCTGAGC CTGGTGGCCT TCTACGAGCG CGCCCAGATC
AGCAACCCCG TGAGCCTGGC CGTGATGCCC ACCAAGACCG ACTGGATGCT GGGCGGCACC
TACAACTTCG AAGTGGCCAA GCTGTACGCA ACCTACGGCC AGGCCAAGGT CAAGGATCTG
GACCGCAAGA ACAGCACCTA CTCGCTGGGC CTGGACGTGC CCGTGACCAG CGCCGGCACC
ATCAAGGCAG CCCTGGCCCG CACCAAGGCC GAGATCGGCG CCGTGGACTC CACGCGCACC
ACGGCCAGCC TGGGCTACGA CCACTACCTG TCCAAGCGCA CCGATGTGTA CACCGTGCTG
ATGCACGACC GCATCACGGA CCTGAAGTCG GGCACCAGCC TGATCGCGGG TATCCGCCAC
CGTTTCTAA
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| Protein sequence | MKRSFIAMAA ALACAGAAHA QSSVQLTGLV DAYAGSMRMA GDASGKGVVG SGGMTTSWWG
MKGQEDLGGG LKVDFQLTVF MRVDTGSPGR FDGDPYFSRD ANVGLSGGFG TVRLGRGMAP
NFLPTILTNP FGDSFTISPL VLHANVGTTA WGSANLTTPS DTGWSNQVVY TTPKFGGLQA
NVHYQFGEKG GDSGKKNIGV NAMYFGGPLS LVAFYERAQI SNPVSLAVMP TKTDWMLGGT
YNFEVAKLYA TYGQAKVKDL DRKNSTYSLG LDVPVTSAGT IKAALARTKA EIGAVDSTRT
TASLGYDHYL SKRTDVYTVL MHDRITDLKS GTSLIAGIRH RF
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