| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2915 |
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| Symbol | |
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| ID | 5748497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3199250 |
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| End bp | 3201448 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641298016 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001563938 |
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| Protein GI | 160898356 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01512] heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.522074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.0959019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCCA ATCGCCTGCC AAGCCCTCAG GGCAACGAGG CCCTGAAAGC CTTCCCAGCC
CATTCCACGC CCGCCTCGAC TTCGCCGTCT TCCGCCTGCG GCACCGATTG CTGCGCGCCC
TTCACCATCA CCCAGCCCAC GCCGGCCCGC AAGAAGGCCC AAGGCCACTC GCATGCGCAT
GGCGAGGGCC ATGGCCACGG TCACGCCCAT GACCACGACC ATGACCACGG TCACGACGAG
AGCGATCCCC ATGCCGGCCA CGACCACAGC GTGCTGCCCG GCTGGCCGCG CATCACGGCC
GCGCTGATTG CAGCCGTGCT GGCAGAAGCC GCCCACTGGG TCAGCGGCTC CCAGGGCGGC
GTGCCTGCCC TGCAATACGG CGGCATGGCC GCGGCCGTGC TGGCCATTGC CCTGTCGGGC
CTGGGCGTCT ACAAGGCCGG CATCCGCGAC GTGCTGCGCC TGAAGCTGGG CATCCATGCG
CTGATGGCCA TTGCCGTCAC GGGTGCCTTC GCCATCGGCC AGTGGCCCGA GGCCGCCATG
GTCATGGCCC TGTACGCCGC GGCCGAGCGC ATCGAGGACC AGGCCATGGA CCGCGCGCGC
AATGCCATCC GCAGCCTGCT GCAGATGGCG CCCGAGACGG CCGACGTGCT CCAGCCCGAC
GGCAGCGTGC AGCGCGTGGC CGCCGCCGAC GTGGCGCTGG ACGCCACCGT GCGCGTGGCC
CCCGGCGCGC GCGTGCCGCT GGACGGCGTG GTCCTGCGCG GCCAAAGCTC GGTCAACCAG
GCGCCCATCA CCGGAGAAAG CGCCCTGGCC GACAAGGCCC CGGGCGACGA GCTCTACGCC
GGCAGCATCA ACCAGGATGG CGAGCTGCAG ATGCGCGTCA CCTCGGCGGC CAATGACAGC
CTGATTGCGC GCATCGTCCA CGCCGTGGAG CAGGCCCAGG CCTCCAAGGC GCCCACCCAG
CGCTTCGTCG ATCGCTTTGC CGCCGTCTAC ACGCCCATCG TGCTGGTGCT GGCCATTGCG
CTGGCGGTGC TGGCACCGCT GGTCATGGAC TGGAGCTGGC ATGACGCGGC CTACCAGGCG
CTGGCCCTGC TGGTCATCTC CTGCCCCTGC GCCCTGGTGC TGTCCACCCC CGTCACCGTG
GTCAGCGCGC TCACGGCCGC GGCACGCCGC GGCCTGCTGA TCAAGGGCGG CCAGGCGCTG
GAATCGGCCC GCAAGCTGCG CGCCATTGCC CTGGACAAGA CCGGCACGCT GACCACGGGC
AGCCCGAAGC TGGTCGAATG GAAATCCTGG AGCGAAGAAG ACGCAGCCCA GGACTCCAGC
CAGCCCGCCG CATATGCCCT GGCCCTGGCC GGCCGCTCGG ACCACCCGGT CTCGCGCGCC
ATTGCTTCCG GCCTCCAGGC CGATGCCGCC GTGGCCGCCG ATGCCGCACG GGCCTCGGTC
AGCAAGCTGC TGGCACTGCC CGGCCGTGGC GTGCAGGCCG AGATCGACGG CCAGCTCTGG
ACCCTGGCCA ACCTGCGCTG GGTGCAGGAG CAAGGCTGGG ACAGCGCCGC GCTGCGCGCC
GGCCTGGCCA TGCACGAAAC CCAGGGCCGC ACCGTGACCC TGCTGGCCGA CAGCAGCGGC
GTGCGGGCCC TGTTCGCCGT GGCCGACCCG CTGCGGCCCC AGGCCCGCGA GGCCGTGGCA
CGCCTGCAGG CCCTGGGCGT GCAGCCCGTG GTGCTCAGCG GCGACAACAC GGCCACCGTG
CGCTCCATCG CTGCCGAAGC CGGCATCCAG GATGCGCGCG GCGGCCTGCT GCCGCAGGAC
AAGCTCGACG CACTGGCCGA GCTGCAGCGC ACCCGCGGTC CCACCGCCAT GACGGGCGAC
GGCATCAACG ATGCACCGGC CCTGGCCCAG GCCGACATCG GCTTTGCCAT GGGCGGCATG
CACAGCACGG GCATGGCCAT GGAAACCGCC GACGTGGTGC TGATGAACGA CGACCTGCGC
CGCCTGCCCG AGGTGGTGGA GCTGTCGCGC AGCGCCCACG CCGTGCTCTG GCAGAACATC
GCCCTGTCGT TGGGCGTCAA GCTGGTGTTC TTCGCACTGG CCCTGGCCGG CAACGCCAGC
ATGTGGCTGG CTGTGCTCGC CGACATGGGT GTGAGCCTTC TGGTGGTCGC CAACGGCCTG
CGGCTGCGCC GCTGGGGCAG CGACAGGGAG GCGGCATGA
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| Protein sequence | MNSNRLPSPQ GNEALKAFPA HSTPASTSPS SACGTDCCAP FTITQPTPAR KKAQGHSHAH
GEGHGHGHAH DHDHDHGHDE SDPHAGHDHS VLPGWPRITA ALIAAVLAEA AHWVSGSQGG
VPALQYGGMA AAVLAIALSG LGVYKAGIRD VLRLKLGIHA LMAIAVTGAF AIGQWPEAAM
VMALYAAAER IEDQAMDRAR NAIRSLLQMA PETADVLQPD GSVQRVAAAD VALDATVRVA
PGARVPLDGV VLRGQSSVNQ APITGESALA DKAPGDELYA GSINQDGELQ MRVTSAANDS
LIARIVHAVE QAQASKAPTQ RFVDRFAAVY TPIVLVLAIA LAVLAPLVMD WSWHDAAYQA
LALLVISCPC ALVLSTPVTV VSALTAAARR GLLIKGGQAL ESARKLRAIA LDKTGTLTTG
SPKLVEWKSW SEEDAAQDSS QPAAYALALA GRSDHPVSRA IASGLQADAA VAADAARASV
SKLLALPGRG VQAEIDGQLW TLANLRWVQE QGWDSAALRA GLAMHETQGR TVTLLADSSG
VRALFAVADP LRPQAREAVA RLQALGVQPV VLSGDNTATV RSIAAEAGIQ DARGGLLPQD
KLDALAELQR TRGPTAMTGD GINDAPALAQ ADIGFAMGGM HSTGMAMETA DVVLMNDDLR
RLPEVVELSR SAHAVLWQNI ALSLGVKLVF FALALAGNAS MWLAVLADMG VSLLVVANGL
RLRRWGSDRE AA
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