| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2911 |
|---|
| Symbol | |
|---|
| ID | 5748493 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3196401 |
|---|
| End bp | 3197849 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641298012 |
|---|
| Product | copper tolerance protein |
|---|
| Protein accession | YP_001563934 |
|---|
| Protein GI | 160898352 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1538] Outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0123072 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCA CCCTCTTCGC CCCCACCCGG CTGGTCGGCG CCATGGCTGC CGTGCTGGCC
CTGGCCGGCT GCGCCAGCAT CTCGCCCGAC GGCCTGCGCG GCGCGGTCCA GTCCCATACC
GCCAGCCGCC TGCCGGACGG CGCCCAGCTG CCGCCAACCG ATCTGCAGGC CCGCGACGCG
GCGCAGCAGC GCATCGACGA GTGGCTGCGC CAGCCGCTGG ACATGGACCA GTCCGTGCGC
ATCGCACTGC TCAACAACCC CGGCCTGCAG GCGCGCCTGG CGCAACTGGG CGTGCAGGAT
GCCGAACGCG TTCAGGCCCT GACCCTGCCC AACCCCACGC TGGCCCTGGG CCGCATGGTC
AACAGCGACG AGCGCGAGAT CGAGCGCCAG CTGAGCTTCG GCCTGGTCAG CCTGATCACC
CTGCCCTGGC GCAGCCGCTG GCAGGGCATG CAGATGGAAC AGGCCACCCT GACCGCCGCG
CAGGATGTGC TGCGGCTGGC CGCCGACACG CGCCGCGCCT GGCTGCGCGC CGTGGCCGCA
CGCCAGCAGC TGGCGTCCAG CGAGCGCATG CACGAGGCGG CCGAGGCCGG TGCCGAGCTG
GCGCGCCGCA TGGCCCGCTT GGGCAACTTC AGCCGGCTGC AGCAGGCACG CGAGCTCAGC
ATCCAGCAGG ACACCGCAGC CCAGCTGGCG CGTGCGCGCC TGGCCGCCAC GGCCGAGCAT
GAGCAACTGG CCCGCCTGAT GGGCCTGTGG GGACGGCGCA TCGATTTCAA GCTGCCCGAC
CAGTTGCCCG CCATCCCGCA GGCCGCCACG CAGTTGCGCT CCGGGGACGA TGCCGAAGCC
ACCGCGCTGC GCGAGCGCCT GGACCTGCGC GCCCTGCGCC GCGACCTGGA CCAGTTGGCC
GAGCGCCGTG GCTGGGCACG CCTGGGCGCC ATGTTCGGCG ACATCGGCCT GGGCTACAAC
CGCAACACCG CCACGGACCG GGCCACCGGC CACAGCGATG TGACACGCGG CTGGGAGATC
GACCTGCCCC TGCCGCTGTT TGACTGGGGT GGCGCCGCCA GCGGCCGCGC GCGCGCCGAG
GTCCAGCGCA GCGCGGCCCA GCTGCAGCAA GGCGCCATCC AGGCGCGGGC CGAGGCGCGC
AGCAGCTGGA TGCGCTACCG CACGGCCTGG GACCTGGCCC ACCAGCAGCA GGCCGAGGTG
CTGCCGCTGC GCCGCTTCAT CCAGGACGAA ACCATGCTCC GCTACAACGG CATGTTCGTC
AGCGTCTGGG AGTTGCTGGC CGAGGCCCGC AACAGCGCCC AGGCCGTGGC CACCGCCACC
GACGCCCAGC GCGACTTCTG GCTGGCCGAC ACCGACCTGC AGCTGGCTCT GGCCGGAACC
TCGCCAGGCA CGGTCGAGGC CGCATCCAGC GCCGCCGCAC CCACTCCCAC GAACACAGCG
AGCCACTGA
|
|---|
| Protein sequence | MKRTLFAPTR LVGAMAAVLA LAGCASISPD GLRGAVQSHT ASRLPDGAQL PPTDLQARDA
AQQRIDEWLR QPLDMDQSVR IALLNNPGLQ ARLAQLGVQD AERVQALTLP NPTLALGRMV
NSDEREIERQ LSFGLVSLIT LPWRSRWQGM QMEQATLTAA QDVLRLAADT RRAWLRAVAA
RQQLASSERM HEAAEAGAEL ARRMARLGNF SRLQQARELS IQQDTAAQLA RARLAATAEH
EQLARLMGLW GRRIDFKLPD QLPAIPQAAT QLRSGDDAEA TALRERLDLR ALRRDLDQLA
ERRGWARLGA MFGDIGLGYN RNTATDRATG HSDVTRGWEI DLPLPLFDWG GAASGRARAE
VQRSAAQLQQ GAIQARAEAR SSWMRYRTAW DLAHQQQAEV LPLRRFIQDE TMLRYNGMFV
SVWELLAEAR NSAQAVATAT DAQRDFWLAD TDLQLALAGT SPGTVEAASS AAAPTPTNTA
SH
|
|---|
| |