Gene Daci_2910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2910 
Symbol 
ID5748492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3195017 
End bp3196399 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content70% 
IMG OID641298011 
Productmulticopper oxidase type 3 
Protein accessionYP_001563933 
Protein GI160898351 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2132] Putative multicopper oxidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.546075 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0186019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCC GCAACTTCTT CACCGGCGCG GCCGTGGCCG CCGTCTCCAG CGCCGCCGTC 
AGCCGCGTGG CCCTGGCCGC CCTGCCCGAG GCAGCGACCC AGTCCTCGGC CGAAACCGCC
GCCCCGCTGG CACCGCCCAA CGGCCGCCCC TACCGCCCCG TGGTCACGCT CAACGGCTGG
ACCACGCCCT GGCGCATGAA CGCAGGCGTC AAGGAATTCC ACCTGGTGGC CGAGCCCGTG
GTGCGCGAGG TGGCACCGGG CTTCTTCGTC AACATGTGGG GCTACAACGG CCAGAGCCCC
GGCCCCACCA TCGAGGTCGT GGAAGGCGAC AAGGTCCGCA TCTTCGTGAC CAACCGCCTG
CCCGAGCACA CCACCGTGCA CTGGCACGGC CAGCGCCTGC CCAACGGCAT GGACGGCGTG
GGCGGCGTGA CCCAGCCGCA CATCCCGCCC GGCAAGACCT TTGTCTACGA GTTCACGGCG
CGCCGCCCCG GCACCTTCAT GTACCACCCG CATGCCGACG AGATGGTGCA GATGGCCATG
GGCATGATGG GCCTGTGGAT CACGCATCCG AAGGCGGCCC ACCCGCAGAT CGCCGAAGTC
CAGCGCGACT ACGCCTTCCT GCTGTCGGCC TACGACGTGG AGCCCGGCTC CATGACGCCA
CGCGTGGCCG AGATGACGGA CTTCAACATC TGGACCTTCA ACAGCCGGGT GTTCCCCGCC
ATCAGCCCCG TCGTCGCCAG GCGCGGCGAC CGCGTGCGCC TGCGCGTGGG CAACCTGACC
ATGACCAACC ACCCCATCCA CCTGCACGGC CACGAATTCG AGGTCACGGG CACCGACGGC
GGCCCCGTGC CCCGGTCCGC GCGCTGGCCC GAGGTGACCA CCGACGTGGC CGTGGGCCAG
ATGCGCCAGG TGGAGTTCAT CGCCGACGAG CTGGGCGACT GGGCCCTGCA CTGCCACAAG
AGCCACCACA CCATGGGCGC CATGGGGCAT GACACGCCGA CCATGATCGG CGTGGACCAC
CGGGGCCTGG TCGGCAAGAT CCAGAAGATC GTGCCCGACT ACATGGTCAT GGGCGAGCGC
GGCATGGGCG ACATGGCCTC CATGGAAATG CCCCTGCCCG ACAACACCTT CCCGATGATG
ACGGGCACGG GCCCCTTCGG CCCCATCGAG ATGGGCGGCA TGTTCACCAC CCTCAAGGTG
CGCGAGCAGC TGGGCGCCAA CGACTACGGC GACCCGGGCT GGTTCAACCA CCCCAAGGGC
AGCGTGGCCT ATGAATGGAA GGGGCCGGCA GCCGAGGCCT CCGCACCGCG CCAGACCACG
CCCGGCCAGT CCCCCGGCGC GCCCAGCGTG CGCAAGCCCG GTGCGGGCCA TGAGCACCAC
TGA
 
Protein sequence
MNRRNFFTGA AVAAVSSAAV SRVALAALPE AATQSSAETA APLAPPNGRP YRPVVTLNGW 
TTPWRMNAGV KEFHLVAEPV VREVAPGFFV NMWGYNGQSP GPTIEVVEGD KVRIFVTNRL
PEHTTVHWHG QRLPNGMDGV GGVTQPHIPP GKTFVYEFTA RRPGTFMYHP HADEMVQMAM
GMMGLWITHP KAAHPQIAEV QRDYAFLLSA YDVEPGSMTP RVAEMTDFNI WTFNSRVFPA
ISPVVARRGD RVRLRVGNLT MTNHPIHLHG HEFEVTGTDG GPVPRSARWP EVTTDVAVGQ
MRQVEFIADE LGDWALHCHK SHHTMGAMGH DTPTMIGVDH RGLVGKIQKI VPDYMVMGER
GMGDMASMEM PLPDNTFPMM TGTGPFGPIE MGGMFTTLKV REQLGANDYG DPGWFNHPKG
SVAYEWKGPA AEASAPRQTT PGQSPGAPSV RKPGAGHEHH