| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2905 |
|---|
| Symbol | |
|---|
| ID | 5748487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3191314 |
|---|
| End bp | 3192459 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641298006 |
|---|
| Product | monooxygenase FAD-binding |
|---|
| Protein accession | YP_001563928 |
|---|
| Protein GI | 160898346 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.00589473 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGTT TGAGGATAGG CATCGTCGGA GCAGGCATTG GCGGACTGGC GGCAGCCAAT
GCGCTGCACC AGGCAGGGCA TGAAGTATTG GTGTTCGAGC AAAGCCGGCA GTTTCTGCGC
GTGGGCGCGG ACATCAACCT CACGCCCAAT GCCGTGCGCG CCCTCGATGG CCTGGGCGCC
GACATTGCCG CCGCCGTGCG CGCCAGCGCC GCACGGCCCA CGCACCGCAT CAGCCGCAAC
TGGGACACGG GCGAGGAAAC CTCGCGCCTG ACCATGGGTG ACGAGGCCGA GCGCAAGTAC
GGCGCCCCGC AGTTGACCAT CCACCGCGCC GATCTGCTGG CCGCGCTGGC CGATGCCTTT
CCGCTGGACC AGGTGCAGTT GGGCAAGCGT GCCAGCCAGA TCACGCAGAC GGGGCAAGGC
GTGGACATCG CGTTCACAGA TGGCAGCGAA GTGGCCGGGC TGGACGCACT CATTGGCGCG
GACGGCATCC ACTCCGTGGT GCGCGCGGCC CTGTTCGGTG CCGAGAGCCC GCGCTTCACG
GGTGTGGTGG CCTTCCGCGC GGTGGTGCCC ACCGAGCGCG TGCGCCATGT GCCCGACATC
CAGGCCTTCA CCAAATGGTG GGGCGCCACG CCGCAAAGCC AGATCGTGAC CTTTCCGCTG
AACCAGGGGC GTGACACCTT CATCTTCGCC ACCACGGCCC AGGATTCCTG GCACGAGGAA
TCGTGGACCA CGCCCGGCAG CGTCGAGGAG TTGCGCGGCT TCTACGCCGA TTTCCATCCC
GACGCCCGGG CGCTGCTCGA CGCCTGCGAT GGCGTGCTCA AGACTGCGCT GTACGAGCGC
GATCCCCTGC CGGCCTGGTC GCAGGACCGC ATCACGCTGC TGGGCGATGC CTGCCACCCG
ATGATGCCCT TCATGGCCCA GGGCGCAGGC ATGGCCATCG AAGACGCCGT GGTGCTGGCC
CGCAACCTGG ATGCCGCCCC GGGCCCGCAG CAGGTGCCCG AGGTCCTGGC GCGCTACCAG
GCCATGCGCA TGCAGCGCAC CAGCGAGATC CAGATCGGCT CGCGCGGCAA CAACTGGCTG
CGCGCCGGTG GCAATGCCGA TGGCGTCTAC GGCTACGACG CCTGGGCGGT TGCGCTGCAG
GCCTGA
|
|---|
| Protein sequence | MARLRIGIVG AGIGGLAAAN ALHQAGHEVL VFEQSRQFLR VGADINLTPN AVRALDGLGA
DIAAAVRASA ARPTHRISRN WDTGEETSRL TMGDEAERKY GAPQLTIHRA DLLAALADAF
PLDQVQLGKR ASQITQTGQG VDIAFTDGSE VAGLDALIGA DGIHSVVRAA LFGAESPRFT
GVVAFRAVVP TERVRHVPDI QAFTKWWGAT PQSQIVTFPL NQGRDTFIFA TTAQDSWHEE
SWTTPGSVEE LRGFYADFHP DARALLDACD GVLKTALYER DPLPAWSQDR ITLLGDACHP
MMPFMAQGAG MAIEDAVVLA RNLDAAPGPQ QVPEVLARYQ AMRMQRTSEI QIGSRGNNWL
RAGGNADGVY GYDAWAVALQ A
|
|---|
| |