Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2899 |
Symbol | |
ID | 5748480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3180184 |
End bp | 3182253 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641297999 |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_001563922 |
Protein GI | 160898340 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.27988 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.214281 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTCG CTTGCTCGGC AAGCTGGGGG CAGGCCTCCA CAACCCTGGA CACCGTCACC GTGCGCTCAT CCGGCGACAG CGCCCTGGAG CGCCCGCTGG CCACCGGCAG CCGACTGGAT CTCAGCGCAC GCGATACGCC CGCCAGTGTC GAAGTGATCA CGCGCGAGCA ACTGCAGGCC AGGGGCGACA CTTCGCTGGT CGATGCAATC ACCCGCTCCA CGGGTATCAC CAGCCTGGGG CATCCGGGCA ACAGCGGCAG TTCGCTGTCG GCACGGGGCT TCACCGACAC CACGTCGGTC ATGCGTTTGT ATGACGGCAC TCGCCAATAT GGCGGTGTGG GCGTGAGTTT TCCCTTCGAC ACCTGGTCCA TAGACCGCAT CGAAGTGCTG CGTGGACCGG CTTCCGTGAT CTATGGCGAT GGCGCCATCG GAGGGGTCAT CAATGTGATT CCCAAGAAGC CCACACGCAG TCCGATACGC AACGAGGTCC AGGCCACGGT GGGCACCGAC GGAAAACGCG GCCTGGCCTT TGGCAGCGGC GGCGCAATCG ATGAGCACTG GTCCTACCGT CTGGATGCCA GTGGAGACCG CTCCGACGGA TGGGTTGACC GGGGTGATTC CAGCAACCGC ACCCTCTCCG CAGCCTTGCG ATGGGATCCG GTGCAGGACT TCAGCGTGCA GCTGTCCCAC GCACTGGGCC GGCAAAAGCC CATGCGCTAC TTCGGCACGC CGTTGATCAA TGGAGTTCAG GATCCGGCGG TGCGCGAACG CAACTACAAC GTGGCCGACA GCCGCATCCA GTACAAGGAC CGCTGGACCG AACTGGCGGC GCAGTGGACG CCCTCCAGCA ACGTGATCGT GCGCAGCAAG CTCTATCACA TAGCCAGCGA CCGCTATTGG CGCAACGCCG AGACCTACCT GTACAACGCA TCCACCGGCC TGATCGACCG ATCCGGAAAC ACCGAGATCG CCCATGACCA GACGCAGACC GGCAACACCA CGGATGCGAC CTTCAGCGGC AGTCTCTTCG GCCGCAAGAA CCAGGTGTCC CTGGGCTTCG ATGTCAACCG CGCGGCATTC CAGCATTCCA ACAACACCTA TGCGGGCAGC TCCGGTCCGG TGGACCCCTA CAACCCCGAT CCCGGTCAAT TCACCAGCTC CATTCCCTTC ATTCCCCGCT ATCGCAACAA GGCCGAGCAA TATGCGCTGT TCGCCGAGGA CCGCCTGGAG ATGACGGACC GCTGGTCATT GGTGGCCGGT GCGCGGTTTG ACCATGCAAA TCTCTCGCGC CAGGACCTGG TGGCCGGGAC GCAGGCCTTC AAGCGCAGCT ACTCCAATGC GGGGTGGCGC TTGGGATCGG TCTACCAACT CCACCCCGGC CTGTCACTGT ATGCCCAGGC ATCCAAGGCG GCGGATCCGG TGAGCGGCCT GCTGATGCTG TCTGCAGCCA ACGCCGCTTT CGACGTGTCC ACAGGGCGGC AGTTCGAAAT CGGCCTCAAG CAATCGTTCT GGGAAGGCAA GGGCGACTGG ACGCTGGCGA TGTACTCCAT CACCAAGAAC AATCTGCTCA CGCGTGACCC TTCCAACCCC GCGCTGCGCA TCCAGGTGGG GCAGCGGTCA TCCAAAGGCA TGGAGAGCAC CCTGTCGATG CAGGTCGCCA AGACGGTTCG GCTGGATGCC AACGTGGCCT TGCTCAAGGC GCGGTACGAC GACTTCAGCG AGTCGGTTGG CGGTGTCACC GTGTCCCGCA ATGGCAACGT GCCCACCGAT GTGCCTGAAC GTGTCGCCAA TGCCTGGGTG GGCTGGAACC TCGCTCCGAA CTGGACACTG TCAGGAGGGC TGCGCCATGT CGGCAAACGC TATGCCGACA ACGCCAATAC CTTGAAGCTG GGGGCGTACA CCACCTTCGA TATGGCACTG CAATGGAAGG CCACCGCGGA TACCACGCTG ACGCTGCGCG GGTTCAACGT TCTGGACAAG CACTATTTCT CCACGGCCTA CTACACCACG ACGCAATGGC TGGTGGGCGA GGGCCGGCGC GCGGAGATCA CGTTGCACCA TCGCTTCTGA
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Protein sequence | MAFACSASWG QASTTLDTVT VRSSGDSALE RPLATGSRLD LSARDTPASV EVITREQLQA RGDTSLVDAI TRSTGITSLG HPGNSGSSLS ARGFTDTTSV MRLYDGTRQY GGVGVSFPFD TWSIDRIEVL RGPASVIYGD GAIGGVINVI PKKPTRSPIR NEVQATVGTD GKRGLAFGSG GAIDEHWSYR LDASGDRSDG WVDRGDSSNR TLSAALRWDP VQDFSVQLSH ALGRQKPMRY FGTPLINGVQ DPAVRERNYN VADSRIQYKD RWTELAAQWT PSSNVIVRSK LYHIASDRYW RNAETYLYNA STGLIDRSGN TEIAHDQTQT GNTTDATFSG SLFGRKNQVS LGFDVNRAAF QHSNNTYAGS SGPVDPYNPD PGQFTSSIPF IPRYRNKAEQ YALFAEDRLE MTDRWSLVAG ARFDHANLSR QDLVAGTQAF KRSYSNAGWR LGSVYQLHPG LSLYAQASKA ADPVSGLLML SAANAAFDVS TGRQFEIGLK QSFWEGKGDW TLAMYSITKN NLLTRDPSNP ALRIQVGQRS SKGMESTLSM QVAKTVRLDA NVALLKARYD DFSESVGGVT VSRNGNVPTD VPERVANAWV GWNLAPNWTL SGGLRHVGKR YADNANTLKL GAYTTFDMAL QWKATADTTL TLRGFNVLDK HYFSTAYYTT TQWLVGEGRR AEITLHHRF
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