| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2896 |
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| Symbol | |
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| ID | 5748477 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3176623 |
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| End bp | 3178683 |
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| Gene Length | 2061 bp |
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| Protein Length | 686 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297996 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001563919 |
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| Protein GI | 160898337 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.148838 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGTCT CCCTCTCCTT CTCGCGCAGC CCCCTGGCCC TGTCCATCAC CCTGGCACTG
GCCTCGGCGG CCCATGCCCA GGGCCTGGTC GCCCCCCAAC CGTTGAGCCA GGACGACTCC
GCCCTGACGC TGGGCACCAT CAGCATCACC TCCAAGGCCT CCGGCCCGCT GTCCACGCGC
AGCGTGTTCA GCTCCGTGGA CATCGTGGGC GCGGACATCC TCGAAAACGA ACATGTGGAC
TACAGCTGGG AGCTGCTGTC CAAGGCGCCC GGCGTGCAGG TCACGCAGTT CAAGCAGGGC
ACGGATGCCG GGCGCTTCTC CTTCCGAGGC TTCAACGGCG AAGGCCGCAT CAATGCGGTC
AAGCTGCTGA TCGATGGCAT CCCCAGCAAT GACAACGCCG GGGGCATGCC CTTTCTGGAC
GCTGTCTTCC CGCTGGACAT CGAGGCCATC GAGATCGTGC GCGGCACCAA TGACGCGCGC
TACGGCCTCA ACAACATCGC CGGCAATGTC AACGTGATCA CCCGCACGGG CGGCAACGAG
GGCCGTGCCA GCGTGACCGT GGGCAGCTTC GGGACCAAGG AGTTTCAGGT GTCCAAGGGC
ATCGAGAGCG GCAACTGGAG CCAGAACTAT TTCCTGGCCT GGCGCGATTC GGACGGCTAC
CGAGACCATG CCGATGCCCG CAAGCTGTCC CTGTCCGGCA AATGGTTCTA CACCTCGGAC
GATGGCCGCT GGCGCACCGG CGTGATCGCG CGCTACTACC GCAACAAGGC GCTGGAGTCG
GGCTACCTCA GCTACGAAGA AGCCATCAAG GCGCCGCGCA GCTCCCCGGC CTACGCGGCG
GCCGACCGTG GCGAGCGGGA AACCGGCCAG CTCAGCGCCC ACCTGGATGG CGAACTGACG
CCCGAGCTGT CGCTGTCCGC CAAGGTCTAC GCCAACCAGT ACGAGAACCA GCGCTGGGTG
CGCTTCTCGG CAGCGGGATC GCAGCAGGAG CGCTACAACG ACGAGCAGCA GCAAGGCGCC
ATCACCACCC TGACCTGGCG CCCCAAGGTG GCCTGGGCGC ATGAATTCAC GCTCGAAGGC
GGTCTGGACG CCCAGCGGCA AAGCAACCTG GGCCAGCGCT ACCGCACCAC GGAGCGCGTG
CGGACCTCGC AGTTCCGCGA CTGGGACTTC GACCTCAATA CGCAGGGCGC CTATGTGCAG
GCCGTGATCC GCCCCATCGA AGCCCTGCGG ATCATCCCGG CGCTGCGCAT TGATGACGTG
GATGGCCACT TCATCGACCG CCTGGCAGGC ACGCGCGCCC CCGTGCATGA CTATGGCCTG
ATCAAGCAGC CCAAGATCAG CATCGCCTAC ACCCTGAGCC AGCAGGCCAG CGTCTACGCG
AACTGGGGCC GGACCTTCCA GATCGGCTCG GGCATCGACG CCTACCGCAC GCAGGATCGC
AACCTCAGGC CCTCCATCAA TGATGGCTGG GAAGCGGGCG TCAAGTTCTC TCCCCTGCCC
TGGCTCAACG GCCGCGTGGC CTACTGGGAG CAGCGCGCCT CGGGCGAGGT GGCCCGGGTG
CTGGGCGTGG ACGGCCTGCC CGACCCCGGC GGCCTGGGCA ACGTGGGCAA GACGCTGCGC
AAGGGCTACG ACATCCAGCT CAACATGAAG CCCCATGCCC GCACCACGGC GTGGATTGCC
TACTCCCACC AGGTGGCACG CATCACCGCG CCCGACCCCA GCGCACCCGC CACCCTGGGC
AAGGAAATCG AGAACGTGCC GCACTACCTG GTCTCGGCCG GCGTGGACTG GCAGGCCACG
GACCGGCTGA AGCTGTCGGC CTGGGGCAAT GCCCAGGGCG ACTACTACCT GGAGCGCACC
AATACCCAGG GCCGCGCAGG CAAGTTCGCC GTGCTGAACC TGGGCGCCAG CTACCGCCTC
TCGGAAACCA TGGACCTGGG CCTGCAGGTC AAGAACGTCA CCAACCGCAA GTACGTCTAC
GCCTGGTATG ACAGCGGCTC CTCGGGCTAC TCACCCGCCG ACGGGCGCGG CGTCTATGCC
AGCATGAACC TGCGCTTCTG A
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| Protein sequence | MSVSLSFSRS PLALSITLAL ASAAHAQGLV APQPLSQDDS ALTLGTISIT SKASGPLSTR
SVFSSVDIVG ADILENEHVD YSWELLSKAP GVQVTQFKQG TDAGRFSFRG FNGEGRINAV
KLLIDGIPSN DNAGGMPFLD AVFPLDIEAI EIVRGTNDAR YGLNNIAGNV NVITRTGGNE
GRASVTVGSF GTKEFQVSKG IESGNWSQNY FLAWRDSDGY RDHADARKLS LSGKWFYTSD
DGRWRTGVIA RYYRNKALES GYLSYEEAIK APRSSPAYAA ADRGERETGQ LSAHLDGELT
PELSLSAKVY ANQYENQRWV RFSAAGSQQE RYNDEQQQGA ITTLTWRPKV AWAHEFTLEG
GLDAQRQSNL GQRYRTTERV RTSQFRDWDF DLNTQGAYVQ AVIRPIEALR IIPALRIDDV
DGHFIDRLAG TRAPVHDYGL IKQPKISIAY TLSQQASVYA NWGRTFQIGS GIDAYRTQDR
NLRPSINDGW EAGVKFSPLP WLNGRVAYWE QRASGEVARV LGVDGLPDPG GLGNVGKTLR
KGYDIQLNMK PHARTTAWIA YSHQVARITA PDPSAPATLG KEIENVPHYL VSAGVDWQAT
DRLKLSAWGN AQGDYYLERT NTQGRAGKFA VLNLGASYRL SETMDLGLQV KNVTNRKYVY
AWYDSGSSGY SPADGRGVYA SMNLRF
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