| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2892 |
|---|
| Symbol | |
|---|
| ID | 5748473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3173287 |
|---|
| End bp | 3174486 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641297992 |
|---|
| Product | cytochrome-c peroxidase |
|---|
| Protein accession | YP_001563915 |
|---|
| Protein GI | 160898333 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.411121 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAAGC CCCATTCGCT TCGGCGGGTG GCGGCATGGA CCGCCGCCCT GTGCGGCCTT
GCCGGGGCCA TCGCCCTGGC GGGCTGCGGG GGCGGCGACA CCGCCGTCCA CGATGACTCC
GGCAGCAGCA CGGGCTGGTC CTGGGTGCTG CCCTCCTTTT TCCCCACGCC CAAGGTGCCC
GACTCCAACC CCATGACGGC GGAGAAGGCC GAGCTCGGCC GCTTTCTGTT CTACGACAGG
CGCCTGTCGG GCAATGGCAC GCAGGCCTGC GCGAGCTGCC ACATACAGTC CAAGGCCTTC
ACCGATGGCC TGACGACATC ACTGGGCTCC ACGGGGCACG CACATCCGCG CAACGCCCAG
AGTCTGGCCA ACGTGGTCTA CAACGCCACG CTGACCTGGG CCAACCCCTC GCTGGTCACG
CTTGAAAAGC AGATGGAGAC ACCGCTGTTC GGCACGGACC CGGTGGAGAT GGGCGTCAAC
GACAACAACA AGGAGGAAAT CCTCGCGCGG CTGGCTGCCG ACACCGGCTA CGGCCCGCGC
TTCGCCAGGG CCTACCCGGG CCAGGCAGCG CCCATCACCT GGGGCAATGT GATCCACGCC
ATCTCGGCAT TCCAGCGCAC CATTCTTTCG GGCAACAGCA AATATGACCA GTACCTCAAG
GGCAGCACGG CACTGAACCC GGCCGAGCAG CGCGGCATGA ACCTGTTCTT CGGCGAAAAG
GCCGAATGCT TCCACTGCCA CAGCAGCTTC AACTTCAACG ACCAGATCGT GCACGCGGGC
AGCCGCATCG TCGAGACCCC GTTCCACAAC ACGGGTCTCT ACAACATCGG CGGCACCGGC
GCCTTCCCCG AGCCCAACCG GGGCGTCTAC GAACTGACCC AGCTCTTCAA GGACATGGGC
AAGTTCCGCG CGCCCAGCCT GCGCAATGTG GAGGTCACCG GCCCCTACAT GCATGACGGC
AGCATCGCGA CGCTGGAGGA AGTGCTGCAG TTCTATGCAG CCGGTGGCCG CAACATCACC
TCCGGCCCGC ATGCCGGCGA CGGGCGGGCC AACCCCAACA AGAACGACTT CATCAACCAG
ATCGCCCTGA CGGCCGACGA CCGCGCCGAC CTGCTGGCCT TTCTCAAAAC CCTCACGGAC
CATGAGCTGC TCACCAACCC CAGGCTCGCC GATCCCTTTG CACGGCAGGC AGGCCAATAG
|
|---|
| Protein sequence | MHKPHSLRRV AAWTAALCGL AGAIALAGCG GGDTAVHDDS GSSTGWSWVL PSFFPTPKVP
DSNPMTAEKA ELGRFLFYDR RLSGNGTQAC ASCHIQSKAF TDGLTTSLGS TGHAHPRNAQ
SLANVVYNAT LTWANPSLVT LEKQMETPLF GTDPVEMGVN DNNKEEILAR LAADTGYGPR
FARAYPGQAA PITWGNVIHA ISAFQRTILS GNSKYDQYLK GSTALNPAEQ RGMNLFFGEK
AECFHCHSSF NFNDQIVHAG SRIVETPFHN TGLYNIGGTG AFPEPNRGVY ELTQLFKDMG
KFRAPSLRNV EVTGPYMHDG SIATLEEVLQ FYAAGGRNIT SGPHAGDGRA NPNKNDFINQ
IALTADDRAD LLAFLKTLTD HELLTNPRLA DPFARQAGQ
|
|---|
| |