| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2886 |
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| Symbol | |
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| ID | 5748467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3168487 |
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| End bp | 3168999 |
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| Gene Length | 513 bp |
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| Protein Length | 170 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641297986 |
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| Product | Tfp pilus assembly protein PilE-like protein |
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| Protein accession | YP_001563909 |
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| Protein GI | 160898327 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.308484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.94282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACCGCCA TCCCATCCAC TACACACCCA TCCACTACAC ACAGGGGCCT GCCGGCCCCG
GCCGTCTGGC TGGCCCTGCG GGCCCCCGAG GAGAAATGCG TGCGCAGCAA GCTACATGGA
TTCACGCTGA TCGAGCTGAT GATCACGGTG GCGGTGGTCG CCATTCTTTC GGCGATCGCC
TACCCCTCCT ACCAGGAATA CGTGCTGCGA TCGCGGCGCG TGGAGGCGCA AAGCCTGCTG
GGCGAGGCCG CCGCCCGGCA GGAGCGCTGG CGGGCGCAGA ACGGCGGCTA CACAAGCTCC
GTCGCCAACC TCAGACTGCC CTGGGGAGAC AAGTCCGAGA ACGGCCACTA CACCCTGACG
ATGGCCACGG CCGCCAATGA CGGCGGCTAC ACGCTCAAGG CCACGCGCAC CGGCCGCCAG
GCATCGGACA GGCGCTGCGG CGACTACACC CTGAACGCCC TGGGCGTGAA GGGCATCTCG
CCCCTGGGAA CGGTGGAGGA CTGCTGGCGC TGA
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| Protein sequence | MTAIPSTTHP STTHRGLPAP AVWLALRAPE EKCVRSKLHG FTLIELMITV AVVAILSAIA
YPSYQEYVLR SRRVEAQSLL GEAAARQERW RAQNGGYTSS VANLRLPWGD KSENGHYTLT
MATAANDGGY TLKATRTGRQ ASDRRCGDYT LNALGVKGIS PLGTVEDCWR
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