| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2882 |
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| Symbol | |
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| ID | 5748463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3162031 |
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| End bp | 3162576 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297982 |
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| Product | type IV pilus modification protein PilV |
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| Protein accession | YP_001563905 |
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| Protein GI | 160898323 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4967] Tfp pilus assembly protein PilV |
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| TIGRFAM ID | [TIGR02523] type IV pilus modification protein PilV
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCGTGC AACGGGTCTG CAACATGTCC ATTCCTTTTT CTTCTCGCAG GCAACGCGGC
GCAGGCCTTA TCGAGGTACT CGTCGCCGTG CTGCTGGTGG CCGTGGGGCT GCTGGGCGCC
GTGCGCATCC ATGTGCGTGC CATTGAATAC ACCGTGGATA CCGAGCGGCG CCAGATGGCA
TCCATGCTGG CTTCCGAACT GCTGGAGACC CTGCGGGGGG ATACGGCCAC GGTCCTGGAC
GCGAAGGGCT CGCCCGTGGC GGAGCTGGGC GGCTACCAGA AGCTGGAGGG TGCGGCGATG
CCCGCGGCCC CTGCGGCCTG CCAGCCTTTG CCGCAGCCGC GGGAGCAGCG CCTGGCCTGC
TGGGGCGATC GGGCCCGCAA GCTGGTGCCC GATCTCACCG CGGACCGCAT CGACAGCTCC
TTCGCCGTGA GCGCCGATGC CGATGGCCTG GTGTCCGTGA CGGTGGCCTG GCCGGTCAAG
AAAGGCCAAT GTCTGGATGG AAGCGACAAT GAATTTTGCA CATTCACGCT GCGGTCGCGG
CTTTGA
|
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| Protein sequence | MRVQRVCNMS IPFSSRRQRG AGLIEVLVAV LLVAVGLLGA VRIHVRAIEY TVDTERRQMA
SMLASELLET LRGDTATVLD AKGSPVAELG GYQKLEGAAM PAAPAACQPL PQPREQRLAC
WGDRARKLVP DLTADRIDSS FAVSADADGL VSVTVAWPVK KGQCLDGSDN EFCTFTLRSR
L
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