Gene Daci_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2878 
Symbol 
ID5748456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3157237 
End bp3157815 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content65% 
IMG OID641297975 
ProductCDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 
Protein accessionYP_001563901 
Protein GI160898319 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID[TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.883847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCCA TGTTTCTTAC AATCCCCACC TTGATGACCT GTACGCGGAT CGTCGCGATT 
CCGCTGATCG TCGGGGTGTT CTACGCGCCG TTCGATGCGG CGACCCGCAA CCTGGTCGCC
ACGGTCATGT TCATCGTCTT CGCGGCCACC GACTGGCTCG ACGGCTACCT GGCGCGCAAG
CTCAACCAGA CATCGGCCTT CGGCGCCTTC CTCGACCCGG TGGCCGACAA GTTCCTGGTC
TGCGCGTCGC TGCTGGTGCT GGTGCACCTG CAGCGCACCG ATGTGTTCGT GGCCCTGATC
ATCATCGGCC GCGAGATCGC CATCTCGGCC CTGCGCGAGT GGATGGCGCA CCTGGGCGCG
GGCAAGAGCG TGGCCGTCCA CATGCTCGGC AAGCTCAAGA CCACGGCGCA GATGGTGGCC
ATCCCCTTCC TGCTGTACGA CGGCCGTTTG TTCGGCATGA TCGACACCGG CGTCTGGGGC
CAGGTGCTGA TCTGGGTGGC GGCGGTGCTC ACCGTCTGGT CGATGGTGTA CTACCTGCAA
AAAGCCCTGC CCGAGATCCG CGCGCGGGTC ACGCACTGA
 
Protein sequence
MAAMFLTIPT LMTCTRIVAI PLIVGVFYAP FDAATRNLVA TVMFIVFAAT DWLDGYLARK 
LNQTSAFGAF LDPVADKFLV CASLLVLVHL QRTDVFVALI IIGREIAISA LREWMAHLGA
GKSVAVHMLG KLKTTAQMVA IPFLLYDGRL FGMIDTGVWG QVLIWVAAVL TVWSMVYYLQ
KALPEIRARV TH