| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2867 |
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| Symbol | rimO |
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| ID | 5748445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 3144119 |
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| End bp | 3145534 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641297964 |
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| Product | ribosomal protein S12 methylthiotransferase |
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| Protein accession | YP_001563890 |
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| Protein GI | 160898308 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0721568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCCCA CGAGCGACGC AACAACCATG ACAACCCCTG CCGGCGCGGC CGCTCCGCGC
GTGGGCTTCG TGTCCCTCGG GTGCCCAAAG GCACTCACGG ACTCCGAACT CATCCTTACC
CAGCTCAGCG CCGAGGGCTA CCAGACCTCC AAGACCTTCG AGGGCGCTGA CCTGGTGATC
GTCAACACCT GCGGCTTCAT CGATGACGCC GTGCGCGAGA GCCTGGACAC CATTGGCGAG
GCGCTGGCCG AGAACGGCAA GGTCATCGTC ACGGGCTGCC TGGGTGCCAA GGCGGGCAAG
GATGGCGGCA ACCTGATCCA GGAAGTGCAT CCCAGCGTGC TGGCCGTGAC CGGTCCGCAC
GCCACGCAGG AGGTGATGAA TGCCGTCCAC ACCCATCTGC CCAAGCCGCA CGATCCCTTC
ATCGACCTGG TGCCGGGCGC CTTTGGCGAG GCGGGCATCA AGCTCACGCC CAGGCACTAC
GCCTACCTGA AGATTTCCGA GGGCTGCAAC CACCGCTGCA CCTTCTGCAT CATTCCCTCC
ATGCGCGGCG ATCTGGTTTC GCGTCCGGTG GGCGATGTGC TCAAGGAGGC GCGTGCGCTG
TTCGAGGGCG GCGTCAAGGA ACTGCTGGTG ATCAGCCAGG ACACCTCGGC CTATGGCGTG
GACGTGAAGT ACCGCACGGG CTTCTGGGAC GGCAAGCCGG TGAAGACGCG TATGCTCGAA
CTGGTGCAGA CGCTGGCCGA GATCGCCGAG CCCTATGGCG CCTGGGTGCG CCTGCACTAT
GTCTACCCGT ACCCCAGCGT GGACGAGATC ATTCCGTTCA TGGCCACGGG CCGCGTGCTG
CCCTATCTGG ACGTGCCCTT CCAGCACAGC CATCCCGATG TCTTGAAGCG CATGAAGCGC
CCCGCCAACG GCGAGAGGAA CCTGGAGCGC CTGCAGCGCT GGCGCGAGAT CTGCCCGGAC
CTGGTGATCC GCTCCACCTT CATCGCGGGA TTCCCCGGCG AGACCGAACA GGAGTTCGAG
CACCTGCTGC AGTTCCTGCG CGAGGCGCAG ATAGACCGCG CGGGCTGCTT TGCCTACAGC
CCGGTCGAAG GCGCTGCCGC CAACGAGATT CCCGGCATGC TGCCCCTGGA GGTGCGTGAG
GAGCGCCGCG CGCGCTTCAT GGCCGTGGCC GAAGAGGTTT CCACTGCGCG CCTGCAAAAG
CGCGTGGGCC AGACCATGCA GGTGCTGGTG GACAAGTCCG TGGGCCTGGG CAAGAAGGGT
GGCGTGGGCC GCAGCTATGC CGATGCGCCC GAGATCGACG GCCTGGTGCA CCTGCTGCCG
CCCGAGAAGG CCAGCAAGAC CTACAAGGTG GGTGACTTCG TCAAGGCGCG CATCGTGGGC
ACGCAGGGCC ACGACCTGGT GGGCCAGCCT GTGTAA
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| Protein sequence | MTPTSDATTM TTPAGAAAPR VGFVSLGCPK ALTDSELILT QLSAEGYQTS KTFEGADLVI
VNTCGFIDDA VRESLDTIGE ALAENGKVIV TGCLGAKAGK DGGNLIQEVH PSVLAVTGPH
ATQEVMNAVH THLPKPHDPF IDLVPGAFGE AGIKLTPRHY AYLKISEGCN HRCTFCIIPS
MRGDLVSRPV GDVLKEARAL FEGGVKELLV ISQDTSAYGV DVKYRTGFWD GKPVKTRMLE
LVQTLAEIAE PYGAWVRLHY VYPYPSVDEI IPFMATGRVL PYLDVPFQHS HPDVLKRMKR
PANGERNLER LQRWREICPD LVIRSTFIAG FPGETEQEFE HLLQFLREAQ IDRAGCFAYS
PVEGAAANEI PGMLPLEVRE ERRARFMAVA EEVSTARLQK RVGQTMQVLV DKSVGLGKKG
GVGRSYADAP EIDGLVHLLP PEKASKTYKV GDFVKARIVG TQGHDLVGQP V
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