Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2854 |
Symbol | |
ID | 5748430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 3129669 |
End bp | 3130463 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641297949 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001563877 |
Protein GI | 160898295 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.110395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGAAAG GCAAGACCGC CCTCGTGACC GGTTCGACCA GCGGAATCGG CCTCGGGATC GCGAAGGCGC TGGCCCGCCA GGGCGCCAAT ATCGTGCTCA ATGGTTTCGG CGATGTGGAC GGCCCGCGGG CCGAAGTGCT GGCCGCAGGC CAGGCCGCCG GCGCCCAGGT CGCCTACCAC GGTGCCGACA TGAGCCGCGT GGCAGACATC GAGGACATGG TCCAGTACAG CGTGCGCAAC TTCGGCCAGA TCGACATCCT CGTGAACAAT GCCGGCATCC AGCACGTGGC ACGCGTGGAA GACTTCCCGC CAGAGCGCTG GGATTCCATC ATCGCCATCA ACCTGTCCAG CGCCTTCCAC ACCTCGCGCC TGGTCCTGCC CATGATGCAG GCGGCCGATG GCGGCAAGGG CTGGGGCCGC ATCATCAACG TGGCTTCGGT GCACGGCCTG GTGGGCTCGG CGCAGAAGTC CGCCTATGTG GCGGCCAAGC ACGGCATTGT CGGTCTGACC AAGGTCACGG CCCTGGAGAA CGCCACCTCC GGCATCACCT GTAACGCCAT CTGCCCCGGC TGGGTGCTGA CGCCGCTGGT GCAAAAGCAG GTGGACGCCA AGGCCGAGCA GCACGGCATC AGCAACGAAG AGGCCAAGAA GCTGCTGCTG GGCGAAAAGG AACCCTCGAT GCAGTTCACC ACGCCCGAGG AGCTTGGCGA GCTGGCTGTG TTCTTCTGCT CGCCCGCTGC CGCCAACGTG CGCGGCGTGG CCTGGAACAT GGATGGCGGC TGGGCTGCGC AGTAA
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Protein sequence | MLKGKTALVT GSTSGIGLGI AKALARQGAN IVLNGFGDVD GPRAEVLAAG QAAGAQVAYH GADMSRVADI EDMVQYSVRN FGQIDILVNN AGIQHVARVE DFPPERWDSI IAINLSSAFH TSRLVLPMMQ AADGGKGWGR IINVASVHGL VGSAQKSAYV AAKHGIVGLT KVTALENATS GITCNAICPG WVLTPLVQKQ VDAKAEQHGI SNEEAKKLLL GEKEPSMQFT TPEELGELAV FFCSPAAANV RGVAWNMDGG WAAQ
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