Gene Daci_2846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2846 
Symbol 
ID5748422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3119500 
End bp3120213 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content67% 
IMG OID641297941 
Productphosphoserine phosphatase SerB 
Protein accessionYP_001563869 
Protein GI160898287 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.793398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.583528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATG TCACCGAATT CGCGCCCGGA CTGCTGATCC GCGGCATCCA GCCTCCGCTG 
AAGCTGGCCG ACTACAAGCT CATCGCGTTC GACATGGACT CGACGCTGAT CACCATCGAG
TGCATCGACG AGATCGCCGA CGCCACCGGC AAGAAGGCCG AGGTCTCGGC CATCACCGAA
GCCACCATGC GCGGCGAGAT CACCGACTTC AAGGACAGCC TGCGCCAGCG CGTGGGCAAG
CTCGTCGGCG TGACCGAGGC CGACATGGCC CGCGTGCTGG CCGAGCGCCT GAAGCTCTCC
CCGGGCGCCG AAACCCTGGT GCGCGCAGCC CAGGCTGCGG GCCTGAAGGT GCTGCTGGTC
TCGGGCGGCT TCACCTACTT TGCCGAACAT GTGCGCGGCA TGCTGGGCAT CGACTTCGTG
CGAGCCAACG TGCTGGAGAT GCGTGACGGC GCGCTGACCG GCGGCCTGAT CGAGCAGCCC
TGGGGCGACA TCTGCGACGG CGCCGAAAAG CGCCGCACGC TGCTGGAAGT CGCCTCGCTG
CTGGGCATTC GCCCCGACCA GTGCATCGCC GTGGGCGACG GCAGCAACGA CATTCCCATG
ATGCAGGTCG CAGGCCTGTC CGTGGCCTAC CACGCCAAGC CGCGCGTGCG CAACGAAGCC
AAGGTCTCCA TCACCGAAGG CGGCCTGGAC CGCCTGCTGG AAGTCCTGCG CTGA
 
Protein sequence
MTDVTEFAPG LLIRGIQPPL KLADYKLIAF DMDSTLITIE CIDEIADATG KKAEVSAITE 
ATMRGEITDF KDSLRQRVGK LVGVTEADMA RVLAERLKLS PGAETLVRAA QAAGLKVLLV
SGGFTYFAEH VRGMLGIDFV RANVLEMRDG ALTGGLIEQP WGDICDGAEK RRTLLEVASL
LGIRPDQCIA VGDGSNDIPM MQVAGLSVAY HAKPRVRNEA KVSITEGGLD RLLEVLR