Gene Daci_2837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2837 
Symbol 
ID5748413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3112814 
End bp3113464 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content68% 
IMG OID641297932 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_001563860 
Protein GI160898278 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.615074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.224283 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGACTG CAAATGTTTC TTCTTCCTGG CTGGCGGGCT TCACGGTCTG CCTGTCTCTC 
ATCGTCTCCA TCGGCGCCCA GAACCTCTAT GTGCTGCGCC AGGCCGTGCA AGGCCAGCAT
GTGCGCGCCT GCGTGGCCTG GTGCGTGGTG AGCGACGTGG TGCTCATCGG CCTGGGCGTG
GCGGGCATGG CCCGGCTGCT GGGCGACAAC CCCGACCTGG CCCGCTACCT GACGCTGGGC
GGCGCCCTGT TCCTGCTGGC CTATGGACTG ATCGCGCTGT GGCGCATGGC CATGGCGCCC
GATGCGCAAC TGGCGGCATC GGGTGGGCAA CTGGCCCCGC GTGGCCTGCT GGGCGTGGTC
TCCACGCTGG CCGTGATCAC CCTGTTCAAC CCCCATGTCT ATCTGGACAC GGTGCTGCTC
ATGGGCTCCA TCGGCGCGCG CCAGGAAGGC GTGCTCAAGT GGGTCTATGT GGTGGGCGCC
GCATCGGCCA GCCTGTCGTG GTTCGTGGCG CTGGCCTTTG CGGGCCGCCG CATGAAGCGC
CTGTTCGAGA AGCCGCAGGC CTGGCGCGTT CTCGATGGCC TCACGGGCGT GATGATGCTG
GCGCTGGCCT GGTGGGTGGC TGGCAGCGCG TTGGCACCGG CAGTTGGCTG A
 
Protein sequence
MWTANVSSSW LAGFTVCLSL IVSIGAQNLY VLRQAVQGQH VRACVAWCVV SDVVLIGLGV 
AGMARLLGDN PDLARYLTLG GALFLLAYGL IALWRMAMAP DAQLAASGGQ LAPRGLLGVV
STLAVITLFN PHVYLDTVLL MGSIGARQEG VLKWVYVVGA ASASLSWFVA LAFAGRRMKR
LFEKPQAWRV LDGLTGVMML ALAWWVAGSA LAPAVG