| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2832 |
|---|
| Symbol | |
|---|
| ID | 5748408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 3107491 |
|---|
| End bp | 3108918 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641297927 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001563855 |
|---|
| Protein GI | 160898273 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0746462 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.203024 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG TCGAGCATCT CCAGGACTTC TTCCAGCAGC AGTCCCCGCG CATGGCGGCC
CTGGCCGACA GCATCTGGTC CCTGGCCGAG CTGCGCTATG CAGAAACCGC TTCTGCCCGG
CTGCACATCG ATGCGCTGGA GCAGGCCGGG TTTCGCATCA CGCGCGGCGT GGCCGGCATT
CCCACGGCCT TCCTGGCCGA ATGGGGCGAC GAGGGCCCGG TGCTGGCCTT CCTGGGCGAG
TACGACGCGC TGTCGGGCCT GAACCAGCAA AGCGGCGCCC TGGTCTGCAC GCCTTCCACC
GACAGCCCGG GCCTGGCGGG CCACGGCTGC GGCCACCATC TGCTGGGCAC CTCGGCGCAT
TTCGCGGCCG TTGCGCTGCA GGAGCACCTG CGCCGCAGCG GCGCCAAGGC ACGCGTGCGC
TACTACGGCT GCCCGGCCGA GGAAGGCGGA TCGGGCAAGA CCTTCATGGC GCGCGCCGGG
GTCTTCGACG ATGTGGACGC GGCGCTGACC TGGCACCCGG CCAGCTTCAC CGGCGTGTTC
AGCCAGAGCA CGCTGGCCAA CATCCAGGCG AAATTCATCT TCCACGGCAA GGCCTCGCAT
GCCGCGCATT CCCCGCACCT GGGCCGCAGC GCGCTCGACG CCGTGGAGCT GATGAACGTG
GGCGTGAACT ACCTGCGCGA GCACATGCCC ACCGATGCGC GGGTGCACTA CGCCATCACC
GACTCGGGCG GCCTGTCGCC CAACGTGGTG CAGGCGCGCG CCGAGGTGCT GTACCTGGTG
CGGGCCGCAC GCAACCACGA GGCGGCCGCG CTGTACGAGC GCGTGCAGAA CGTGGCGCGC
GGCGCCGCGC TGATGACGGA CTGCCGGCTG GAGATCGTCT TTGACAAAGC CTGCTCCAAC
CTGCTGCAGA ACCGCACGCT GAACCAGGTG ATGTATGCGC AGATGCAGGC CCTGGGCCCG
CTGCGCGTGG ACCCCGGCCA GCATCGCCTG GCCGGAGACT TCCAGGCCAC GCTGGACAGC
AACGACGTGG ACCAGGTCAG CCGCCCGCTG GCCAGCGTGC TGCGCGGCAA GGTGCCAGCC
GTGTTCGAAG GCCTGGCGCC CTACGATCCT GCCGTGGAGG ACACCCTGTT CGGCTCCACC
GACGTGGCCG ATGTGAGCTG GATCACGCCC ACCGTCCAGG CCTGGGTGGC CTGCTACGCC
TTCGGCACGC CGCTGCACTC CTGGCAGATG GTCTCGCAAG GCCAGTCCGG CCTGGCCCAC
GCAGGCATGG TGCGCGCCGC CCAGGTGCTG GCGGCCACGG CCATCGCCTT GCTGGAGCAG
CCCGAACGCA TTGCCCAGGC CAAGGCGGAG CTGCTTGAGC GCCGCGGCGG CCGACCCTAT
GCGTGCCCGA TTCCTGCGGA GGTGCCCTTG CCGTTCATGC GGGGGTGA
|
|---|
| Protein sequence | MSAVEHLQDF FQQQSPRMAA LADSIWSLAE LRYAETASAR LHIDALEQAG FRITRGVAGI
PTAFLAEWGD EGPVLAFLGE YDALSGLNQQ SGALVCTPST DSPGLAGHGC GHHLLGTSAH
FAAVALQEHL RRSGAKARVR YYGCPAEEGG SGKTFMARAG VFDDVDAALT WHPASFTGVF
SQSTLANIQA KFIFHGKASH AAHSPHLGRS ALDAVELMNV GVNYLREHMP TDARVHYAIT
DSGGLSPNVV QARAEVLYLV RAARNHEAAA LYERVQNVAR GAALMTDCRL EIVFDKACSN
LLQNRTLNQV MYAQMQALGP LRVDPGQHRL AGDFQATLDS NDVDQVSRPL ASVLRGKVPA
VFEGLAPYDP AVEDTLFGST DVADVSWITP TVQAWVACYA FGTPLHSWQM VSQGQSGLAH
AGMVRAAQVL AATAIALLEQ PERIAQAKAE LLERRGGRPY ACPIPAEVPL PFMRG
|
|---|
| |