| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2828 |
|---|
| Symbol | |
|---|
| ID | 5748404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3104518 |
|---|
| End bp | 3105504 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641297923 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001563851 |
|---|
| Protein GI | 160898269 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.384643 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.180289 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTTGT CCCGTTCCCG TTTTCTGTCG TGTCTGATGG CCGGTGCCAC GGCACTTGCG
CTGCCCGCAG CCAAAGCCCA GCCCCAGTCC TACCCGGATC GCCCGATCAA GCTGGTCGTG
CCGTTTGCGC CGGGCGGCGC CACCGACATC CTGGGCCGGC TGCTGGCCAC CTCGCTGGGT
GAACGGCTGG GCCAGCCCGT GGTCGTGGAA AACCGCCCTG GTGCAGGCAC GGTGGTGGCG
GGCGCGCTGG TGGCCAAGGC GCCGCCCGAC GGCTACACGC TGCTGCTGGG CGCCAGCACC
ACGTTGACGC TCAACCCCGC CATCCGCAAC CCGCTGCCCT ATGACCCGCT GCGCAGCTTC
ACGCCGCTGG GGCTGGTGGC CGACATGGGC CTGGTGCTGG TGGCCCATAA CGAAACGCCT
GCACGCACGC TGCCCGAACT CGTGGCCCTG GCCAAGGCCG ACCCCGACAA CCTGTCCTAC
GGCTCCTTCG GCACGGGATC CTCGGTGCAC TTCGGCGGCG AAATGCTCAA GACCGCCACG
GGCATGCGCA TGGTGCATGT GCCCTTCAAT GGCAGCTCGC CCAGCCTCAC CGCGCTGATG
GGCGGCCAGG TGCAGGTGGC CGTGGACACG GTGGTGGCCA CCACGCCGCT GATCAAGGCC
GGCAAGATCC GTCCCATCGC AGCCCTGGGC CCCCAGCGCC TGGCCCTGCT GCCCCAGGTG
CCCACCGTGG CCGAAAGCGG CTACCCGGGC TTTGCCATGG ACACCTGGTT TGCCTTCCTC
GCCCCGGCGG GCCTGCCCGC ACCCATCCAG AAGAAGCTGG AAAAGGCGCT GGCCGACGCC
ATGGCCGAGC CGGCCATGAA GAAGAAGCTG GTGGACATCG GCCTGTCGCC CGCATGGGGT
CCGGCCAGCG CGCTGCAGGA GCGCATAGAG CGCGAACTGC CGCAAATGCG CGCCGTGGCC
GCCAGAGCCG ACATCAAGGT GGATTGA
|
|---|
| Protein sequence | MALSRSRFLS CLMAGATALA LPAAKAQPQS YPDRPIKLVV PFAPGGATDI LGRLLATSLG
ERLGQPVVVE NRPGAGTVVA GALVAKAPPD GYTLLLGAST TLTLNPAIRN PLPYDPLRSF
TPLGLVADMG LVLVAHNETP ARTLPELVAL AKADPDNLSY GSFGTGSSVH FGGEMLKTAT
GMRMVHVPFN GSSPSLTALM GGQVQVAVDT VVATTPLIKA GKIRPIAALG PQRLALLPQV
PTVAESGYPG FAMDTWFAFL APAGLPAPIQ KKLEKALADA MAEPAMKKKL VDIGLSPAWG
PASALQERIE RELPQMRAVA ARADIKVD
|
|---|
| |