Gene Daci_2825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2825 
Symbol 
ID5748401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3100808 
End bp3101881 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content66% 
IMG OID641297920 
Producthypothetical protein 
Protein accessionYP_001563848 
Protein GI160898266 
COG category[S] Function unknown 
COG ID[COG4804] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.0564066 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTC GCAAGATATC CGTTTCTCCC GCGCTCGCAT CGTCACAGGC CCTGCTGGGC 
AATGTGCGGG ACCTGATCGA GGCCGCGCGG CTTCGCGTGG CAGCCAACGT CAACAGTGAA
CTCACCCTGC TGTACTGGCA CATCGGCCAG CACATCCATG GCCATGAATC CGAGGTTCGG
CAGGCAGGCT GCAGCGATGA GGTCCTGCCG GTGCTGGCCG GGCATCTGGT CCAGGACTAT
GGCAGCAGCT TCTCGGAGAA GAACCTGTGG CGCATGACGC AGTTCTCCAC CGCGTTTCCC
GACCAGCCCC TGGTCATCTC GCCGACCCGG AAATTGAGCT GGGCGCATTT CATCGTGCTG
ATTGCGATCA AGGACCCAGT GCAGCGCGAG TACTACGCCA GCATGGCGAG CCTCGAGCGC
TGGAGCGCAC GCACGCTGCG CAGCCGCATC GACTCCCAGC TCTATGAACG CCTGGCGCTG
CCCTGCGATG CCGAGGCGCT GATCGCGCAG GAGCCGGTCA CGCCGCGCAG CACCGAGCGC
ATGTCGCCGG CGCTGTTCAT GCGCGATCCC TACATCTTCG ACTTTCTGGG GCTGCACGAT
GCCTGGCAGG AGGGCGACCT GCAGGCCGCC ATCATCCGCG AGATGGAGTC CTTCCTGCTG
CGGTCGGGCA CGGGCTTCAC CCTGGTGGCG CGGCAAATGC ACATGCATGT GGATGAGCAG
GACTTCCACC TCGATCTGCT GTTCTACAAC CGCAAGCTGC GGCGGCTGGT GGCGGTGGAG
CTGAAGGTGG GCGAATTCAC GGCCGAGGAC AAGGAGCAGA TGGAGCAATA CCTGCGCTGG
CTGGACCGGC ATGAGCATGA GCAGGGCGAG AACACGCCGA TGGGCATGGT GCTGTGCACG
GGCAACAGCT CCGAGCAGAT CGAGCTGCTG GAGCTGGGAC TGCGCGGCGT GCAGATGGCC
GAGTACCTGC CCGGCCTGCC TGAGCGCCAG ACGCTGGCAC AGCGGCTGCG GCAGGCCACA
CGCCGGGCGC AGTGGCATTG GGCGCAGCGC CAGCTGGAAG GCGGCCTGGC CTGA
 
Protein sequence
MATRKISVSP ALASSQALLG NVRDLIEAAR LRVAANVNSE LTLLYWHIGQ HIHGHESEVR 
QAGCSDEVLP VLAGHLVQDY GSSFSEKNLW RMTQFSTAFP DQPLVISPTR KLSWAHFIVL
IAIKDPVQRE YYASMASLER WSARTLRSRI DSQLYERLAL PCDAEALIAQ EPVTPRSTER
MSPALFMRDP YIFDFLGLHD AWQEGDLQAA IIREMESFLL RSGTGFTLVA RQMHMHVDEQ
DFHLDLLFYN RKLRRLVAVE LKVGEFTAED KEQMEQYLRW LDRHEHEQGE NTPMGMVLCT
GNSSEQIELL ELGLRGVQMA EYLPGLPERQ TLAQRLRQAT RRAQWHWAQR QLEGGLA