| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2823 |
|---|
| Symbol | |
|---|
| ID | 5748399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 3098910 |
|---|
| End bp | 3099917 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641297918 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001563846 |
|---|
| Protein GI | 160898264 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.628668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0754293 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACC AGGCATCGAA GTCGCGCCGC ACCGCCGTGG CCTGCGCACT TGCCGCCGTG
CTGGCCACCG GGCTGGCGCC CTGGACCGTG GCCGGCGCCC AGCCGGCCTT CCCGAGCAAG
CCCGTGCGCC TGCTCGTCGG CTTTCCTGCG GGAACCGGGC CGGACATCGT GGCGCGCCTG
CTAGCGCAGA AACTCTCCGA GCAATGGGGC AACCTGGGCG TGGTCGTGGA CAACAAGCCG
GGCGCTGGCG GCCTCATCGC CGCCAGCGAG GCGGCACGGG CCGTGCCTGA CGGCTACACG
CTGATGCTGG GCGAGACCGG CCAGCTCAGC ATTGCCCCCA ACACCTACCA GCGCCTGCCC
TACGACCCGC AAAAGGACTT CGTGCCCGTC AGCCAGGTCG TCACCTCCGA CTTCGTGCTG
CTGGTCAATC CGCAGAAAGT GCCGGCCCGC AATGTGCCCG ATTTCGTGGC CTGGGCGCGC
CAGCGCAAGG AGCTGTTCAT CGCCACCTTC GGCGCCGGCA CGCCCGGCCA CTTCGGCGCC
TTCATGTTCG GCAATGCCGT GCAGCTCAAG CCCGAGCCGG TGCACTACAA GAACACCAAC
GATGCCCTGG GCGGCCTGTT CAGCGGCGAC GTGCAGGCCG TCTTCGCCAC GGCGGCCCTG
GCCGCGCCCC AGGTCAAGGC CGGCAAGCTC ACGGCCCTGG GCAGCACGGG CGCCACGCGC
ACCCAGTCCA TGCCCGAGCT GCCCACCATC CGGGAGCAGG GCTATCCGTC GCTGGAGTTC
AATTCCTGGT TCGGCGTGGT CGCGCCCGCC AAGACACCGC CCGAGATCGT GGCCAGGCTG
CAGGCCGACA TCGTGCGCGC CCTGCAGCAG CCCGACAGCC GCAGCCGGCT GGAAGAAGCC
GGTTTCCGCG TGACGGGCAC CACGGGCGAC GAACTCGCCC GCATCATGCG CGCCGACACG
GTCACCTGGG GCAAGGCCGT GGCAGCCACG GGCTTCAAGG CCGATTGA
|
|---|
| Protein sequence | MKNQASKSRR TAVACALAAV LATGLAPWTV AGAQPAFPSK PVRLLVGFPA GTGPDIVARL
LAQKLSEQWG NLGVVVDNKP GAGGLIAASE AARAVPDGYT LMLGETGQLS IAPNTYQRLP
YDPQKDFVPV SQVVTSDFVL LVNPQKVPAR NVPDFVAWAR QRKELFIATF GAGTPGHFGA
FMFGNAVQLK PEPVHYKNTN DALGGLFSGD VQAVFATAAL AAPQVKAGKL TALGSTGATR
TQSMPELPTI REQGYPSLEF NSWFGVVAPA KTPPEIVARL QADIVRALQQ PDSRSRLEEA
GFRVTGTTGD ELARIMRADT VTWGKAVAAT GFKAD
|
|---|
| |