Gene Daci_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2820 
Symbol 
ID5748396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3096291 
End bp3097370 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content71% 
IMG OID641297915 
Producthypothetical protein 
Protein accessionYP_001563843 
Protein GI160898261 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.407557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.294179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATT GTGCGCTGGC CCGGCACGGG CAACCATGCG GGCTTGCGAA AAGAACAAAT 
GGAGACATGA CCATGCCGGA TTCTTTCTTT CCCCTGCCGT CGAGCCTTTT GCGCCGCCGA
AGCCTGGTGG CCGCTGCACT CGCCTTGCCC CTGCTGGGCC ATGCCCAGGC CTGGCCCGCG
CGGCCCATCG TGATGATCGT CCCGCAGGCG CCGGGCGGCA CCAACGACAT CGTGGGCCGG
CTGGTGAGCC AGAAGCTGGC CGAGGTGCTG GGCGCCAGCG TGGTGGTCGA GAACCGGCCC
GGCGCGGGCG GCAACATCGG CACCCAGGCC GTGGCCAAGG CGCCGCGCGA CGGGCATACC
CTGCTGATGA CCATCAGCAG CAGCCAGGCC ATCAACCCCG CGCTGTACCG CAAGCCGGGC
TTCGATCCGG TGAAGGACTT CCGGCCCATC GGCCTGATCG GCTCCGTGCC CAATGTGCTG
CTGGCCCATC CCGGCTTTGC GGCCAAATCC GTGCCCGAGC TGATCGCCAT GGCCCGGGGC
CGGCCCGACG AGTTCCGCTA TGCCTCGGCC GGCAACGGCA CGCTCAACCA TCTGCTGGGC
GAGATGCTCA ACAGCATGGC GGGCATCCAG CTGCAGCATG TGCCCTACAA GGGCGTGGCG
CCCGCGCTCA ACGATGTGCT GGGCGGGCAG GTGCCGCTGC TGTTCGGCAG CCTGCCATCA
ACGCTGCCCC ATATCCAGGC CGGCCGGCTG CGTGCGCTGG CCGTGAGCGG CGCGGCGCGA
TCGCCGCTGC TGCCCGATGT GCCCACCATT GGCGAGACCG TGCCCGGCTA CAACGGCACG
CTGTGGGTGG GGCTGTTTGC GCCTGAAGGC GTGCCCGCGC CGGTGCTGGC GCAGTTGCAG
GACGGCATGG CCCGCGCGCT GGCGGCCGGC GATCTGCGGG GCAAGCTCGA AGCCTCGGGC
GTGGAGCTGG CCGGGCCGGC GGACAGGCCC GTGCCGCCCG CCCAGATGGC GGCCCTGCTG
CGCGAGGACA TCGCCAAGTG GGCGCGCATC GTCAAGGCGT CCGGCGCATC GCTGGATTGA
 
Protein sequence
MRDCALARHG QPCGLAKRTN GDMTMPDSFF PLPSSLLRRR SLVAAALALP LLGHAQAWPA 
RPIVMIVPQA PGGTNDIVGR LVSQKLAEVL GASVVVENRP GAGGNIGTQA VAKAPRDGHT
LLMTISSSQA INPALYRKPG FDPVKDFRPI GLIGSVPNVL LAHPGFAAKS VPELIAMARG
RPDEFRYASA GNGTLNHLLG EMLNSMAGIQ LQHVPYKGVA PALNDVLGGQ VPLLFGSLPS
TLPHIQAGRL RALAVSGAAR SPLLPDVPTI GETVPGYNGT LWVGLFAPEG VPAPVLAQLQ
DGMARALAAG DLRGKLEASG VELAGPADRP VPPAQMAALL REDIAKWARI VKASGASLD