Gene Daci_2814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2814 
Symbol 
ID5748390 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3090086 
End bp3090724 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content71% 
IMG OID641297909 
Productputative aldolase 
Protein accessionYP_001563837 
Protein GI160898255 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.216378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AATCCCGCAT CCGCGAGCAG ATCTGCGCCA CCGGCGCCAG CCTCTTCCAG 
CGCGGCTACA CCGTCGGCGC TGCCGGCAAC ATCAGCGCGC GCCTGCATGA CGGCTGGCTG
ATCACCCCCA CCGACGCCTG CCTGGGCCGG CTCGACCCGG CCGAGCTGTC CAAGGTCGAT
GCCGGCGGGC AGTGGGTCAG CGGCGCCAAG CCCTCCAAGA CCCTGGTCCT GCATCGAGGC
ATCTACGGCA ATGACGGCGA GGCGCGTGCC GTCATCCACA CGCATTCCAC CCATCTCGTG
GCGCTGACGC TGTCCGGCGT CTGGCGCGAG GACGAGGTGC TGCCGCCCAT CACCCCCTAC
CAGGTCATGA AGGTGGGCCG CATCCCGCTG ATCCGCTACC GCCGCCCCGG CGACCCGCAG
GCCGCCGCCG AGGTGGCCGC GCAGGCTGCC CAGGTGCGCG GCGCCCTGTT CGAGCGCCTG
GGCCCCGTGG TCTGGGAACG CTCGGTGGAG CAGGCCAGCC ATGTGCTGGA AGAGCTGGAG
GAAACCGCAA GGCTCTGGCT CATGACCCAT CCCCGGCCGC AGCCCCTGGA CGCGGCCGCC
ATCGACGAGC TGCGCACCAC CTTCGGGGCG CGCTACTGA
 
Protein sequence
MSDESRIREQ ICATGASLFQ RGYTVGAAGN ISARLHDGWL ITPTDACLGR LDPAELSKVD 
AGGQWVSGAK PSKTLVLHRG IYGNDGEARA VIHTHSTHLV ALTLSGVWRE DEVLPPITPY
QVMKVGRIPL IRYRRPGDPQ AAAEVAAQAA QVRGALFERL GPVVWERSVE QASHVLEELE
ETARLWLMTH PRPQPLDAAA IDELRTTFGA RY