Gene Daci_2813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2813 
Symbol 
ID5748389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3088640 
End bp3089971 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content66% 
IMG OID641297908 
Productmajor facilitator transporter 
Protein accessionYP_001563836 
Protein GI160898254 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID[TIGR00893] d-galactonate transporter 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.330975 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAA CGGATATCGC ATCCGGCCAG GCCGGGGCCC ACCCTGCCCA GGCCGCCTCT 
CCGGAGACGG CGCGCGCCTA CGCCAAGGTG TTCTGGCGCC TCGTGCCGTT CCTGATGCTG
TGCTATGTGA TCGCCTACCT GGACCGCGTG AACGTGGGCT TTGCCAAGCT GCAGATGTCA
CAGGACCTGG GCTTCAGCGA GACCGTGTTC GGCCTGGGCG CAGGCGTGTT CTTCATCGGC
TACTTCCTCT TCGAGGTGCC CAGCAACCTG CTCATGCACC GCCTGGGCGC GCGCGTCTGG
ATCGCCCGCA TCATGATCAC CTGGGGCATT CTGTCGGCCA TGTTCATGTA TGTGGAAACG
CCCACGGGCT TCTACATCCT GCGCTTTCTG CTGGGCCTGG CCGAGGCGGG CTTCTACCCC
GGCGTGATCC TGTACCTGAC CTACTGGTAC CCGGCCCACC GGCGCGCCAA GATCGTGGCG
CTGTTCATGT CGGCCATCCC CGTGGCCGGC ATCTTCGGCA ACCCGCTGTC CGGCTGGATC
ATGCAGGCCT TCCACGGCGA CCATGGCCTG CACGGCTGGC AGTGGATGTT CCTGATCGAG
GCCATCCCCG CCCTGGTGAT CGGCGTGGTG ACCATCTTCT ATCTGGACAA CGGCATCTCC
AGCGCCAAGT GGCTGACCGC CTCCGAAAAG CAGCTGCTGG CGCGCGAGAT CGAGCTGGAC
CAGCAGCACT CAGGCGCCCA GAAGCATTCG CTCAAGGCCG TTTTCGCCGA CCGCCGCGTC
TGGTGGATGT GCCTGATCTA CTTCGCCTTC GTCGCCGGCC AGTACGGCCT GACCTTCTGG
ATGCCCACGC TGATCAAGTC CACGGGCGTC ACGGGCGCGC TGAACATCGG CCTGCTCAGT
GCCATCCCCT TCCTGTGCGC CATCGTGGTG ATGAACCTCA TGGGCCACAG CGCCGACAAG
CGCCGCGAGC GCCGCTGGCA CCTGATCGTG CCCGCGCTGA TGGGCGCCGT GGGCTTTGCG
ATGACGGCCT TCTTCGCCGA CAACACGGTT CTTTCCCTGA TCTTCCTGTC GCTGGCCGCA
GCCGGCGTGC TGACCTGCGC GCCGCTGTTC TGGTCGCTGC CCACGGCCTT CCTGTCGGGC
ACGGCGGCGG CGGCGGGCAT TGCCATCGTC AACTCGGTCG GCAACCTCGC GGGCTTCGCC
AGCCCTTACA TGATCGGCTA CCTCAAGGAC CTGACCCAGT CCACGCAGGC CGGCATGTTC
GTGCTGGCGG GAGTGCTCGT GGTGGGCGCC ATCGCGGTCT GGCTCACCCC CGCAAAGATG
GTCAACCGCT GA
 
Protein sequence
MTTTDIASGQ AGAHPAQAAS PETARAYAKV FWRLVPFLML CYVIAYLDRV NVGFAKLQMS 
QDLGFSETVF GLGAGVFFIG YFLFEVPSNL LMHRLGARVW IARIMITWGI LSAMFMYVET
PTGFYILRFL LGLAEAGFYP GVILYLTYWY PAHRRAKIVA LFMSAIPVAG IFGNPLSGWI
MQAFHGDHGL HGWQWMFLIE AIPALVIGVV TIFYLDNGIS SAKWLTASEK QLLAREIELD
QQHSGAQKHS LKAVFADRRV WWMCLIYFAF VAGQYGLTFW MPTLIKSTGV TGALNIGLLS
AIPFLCAIVV MNLMGHSADK RRERRWHLIV PALMGAVGFA MTAFFADNTV LSLIFLSLAA
AGVLTCAPLF WSLPTAFLSG TAAAAGIAIV NSVGNLAGFA SPYMIGYLKD LTQSTQAGMF
VLAGVLVVGA IAVWLTPAKM VNR