| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2810 |
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| Symbol | |
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| ID | 5748386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3085395 |
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| End bp | 3086678 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641297905 |
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| Product | type III effector Hrp-dependent outers |
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| Protein accession | YP_001563833 |
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| Protein GI | 160898251 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3395] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.403245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTC TTCTGGGCTG CATAGCCGAC GACTTCACGG GCGCCACCGA TCTGGCGAAC
AACCTGGTGC GCGCAGGCAT GCGCGTGGTG CAAAGCATTG GCGTACCCGC CGGCCCGGTG
GACGAGGGCG TGGACGCCGT AGTTGTCGCG CTCAAGTCGC GCACCATCGC GCCGGCCGAC
GCCATTGCGC AATCGCTGCA GGCCCTCCAA TGGCTGCAGG CCCAGGGCGC CAATGGCCGC
GCGCCGCAGA TCTACTTCAA GTACTGCTCC ACCTTCGACA GCACGCCGCA GGGCAACATC
GGCCCCGTGG CCGATGCACT GATGGACGCG CTGGGCTGCG AATTCACCAT TGCCACGCCG
GCCTTCCCCG ACAACCAGCG CACCGTCTTC AAGGGCCACC TGTTCGTGGG CGATGTGCTG
CTCAGCGACA GCGGCATGCG CAACCACCCG CTCACCCCCA TGACCGATGC CAACCTGGTG
CGCGTGCTGC AGGCGCAGAC AGGGCGCAAG GTGGGGCTGA TCGACCATGT GGCCGTCGCG
CAGGGCGAGG CCGCCATCCG CGCGCGCATC GCCGCACTCC AGGCCGAGGG CGTGGGCATG
GCCGTGGTCG ATGCCGTCTC CAACGACGAC CTGCTGCGCC TGGGCCCGGC TCTGGCCGGC
ATGCCCCTGG TCACAGCGGG CTCGGGCGTG GCCATCGGCC TGCCCGCGAA CTTCGGCATC
CAGCCCACGG CACAGGCCGC TGCCCTGCCA ACCGCCACCG GCCTGCAGGC GGTCGTCTCG
GGCAGTTGCT CGGCGGCCAC CAATGCGCAG GTGGCGCACT TCATCGCCTC GGGGCGCCCT
GCCCTGGCGC TGGAGCCCCT GCGCATCGCC GCCGGCGAGG ACGAAGCCGG CAAGGCCCTG
GCCTGGGCCC GCCAGCACAT CGCCAGCGGC CCGGTGCTGA TCTACTCCAC GGCCGAATCC
TCGGCCGTCA AGGCCGTGCA GGGCCACCTG GGCGTGGAGC AGGCCGGCGC CCTGGTCGAA
CAGACCATCG CCGCCATCGC CCGGGGGCTG GTCGAGATGG GCGTGCGCCA GCTCGTCGTG
GCCGGTGGCG AAACCTCGGG CGCCTGCGTG CAGGCGCTGG GCATCGAGCA AATGCGCATA
GGGCCGCAGA TCGACCCTGG CGTGCCCTGG TGCCATGCCG CCTCGCCCCT GGCGCCGCAG
GGGTTGCACC TCACGCTCAA GTCCGGCAAC TTCGGCACCA CGGACTTCTT CACCAAGGCC
TTCGGCGCGC TGGCAAGCGC CTGA
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| Protein sequence | MTLLLGCIAD DFTGATDLAN NLVRAGMRVV QSIGVPAGPV DEGVDAVVVA LKSRTIAPAD
AIAQSLQALQ WLQAQGANGR APQIYFKYCS TFDSTPQGNI GPVADALMDA LGCEFTIATP
AFPDNQRTVF KGHLFVGDVL LSDSGMRNHP LTPMTDANLV RVLQAQTGRK VGLIDHVAVA
QGEAAIRARI AALQAEGVGM AVVDAVSNDD LLRLGPALAG MPLVTAGSGV AIGLPANFGI
QPTAQAAALP TATGLQAVVS GSCSAATNAQ VAHFIASGRP ALALEPLRIA AGEDEAGKAL
AWARQHIASG PVLIYSTAES SAVKAVQGHL GVEQAGALVE QTIAAIARGL VEMGVRQLVV
AGGETSGACV QALGIEQMRI GPQIDPGVPW CHAASPLAPQ GLHLTLKSGN FGTTDFFTKA
FGALASA
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