Gene Daci_2794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2794 
Symbol 
ID5748370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3071761 
End bp3072564 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content73% 
IMG OID641297889 
ProductABC transporter related 
Protein accessionYP_001563817 
Protein GI160898235 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.336051 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAC TGGCCCCCGC CCTGCAAGCG CGCGCCCTGA AGGTTCGCCT GGGCGATCGA 
CAGGTCCTGG GCGGCCTGAG CCTGGCCCTG CCCGCCGGCC GCTGGACCGC CATCGTCGGC
CCCAATGGCG CAGGCAAATC CACGCTGCTG CGCGCCCTGG CAGGCATGGA GTCCGGCGCT
GGCGTGCAAG GCGAGGTGGA GCTCCTGGGC CGCCCGCTGC GGCAATGGAG TGCGCGCGAA
CGGGCCTGCT CGCTCGCTTG GCTGGGCCAG AACCAGCCCG TGGCCGGCGA CATGCGGGTC
CATGACGTGG TCATGCTGGG CCGCCTGCCG CACCAGGGCT GGCTGGCTGC GCCCAGCCAG
GCAGACCATG CCGCCGTGGA GCAGGCGCTG CGCCAGACCC AGGGCTGGGA CTGGCGCATG
CGCAGCGTGG GCAGTCTCTC GGGCGGGGAG CGCCAGCGCG TGCTGCTGGC GCGCGCCCTG
GCCGTGCAGG CCCGCGTGCT GCTGATGGAC GAACCCCTGG CCAACCTCGA CCCGCCGCAC
CAGGCCGACT GGCTCGAATG CGTGCAGGCC CTGGTCGCCC AGGGCCGCAC CGTGGTCAGC
GTGCTGCACG AGATATCGAT GGCCTTGCAG GCCCAGGACC TGGTCATTCT CGACAAGGGG
CAGGTGATGC ACCAGGGAGC CTGCGCCGAC GCGGCCACGC ATGCGGCGCT GGAGGCCGTG
TTCGAGCACC GGCTGCGCAT CCGCGCCATC GACGGGCAGT GGCTGGCCCT GCCACGGCTG
CGGGGGCAAG CTGCGGCGCC TTGA
 
Protein sequence
MTALAPALQA RALKVRLGDR QVLGGLSLAL PAGRWTAIVG PNGAGKSTLL RALAGMESGA 
GVQGEVELLG RPLRQWSARE RACSLAWLGQ NQPVAGDMRV HDVVMLGRLP HQGWLAAPSQ
ADHAAVEQAL RQTQGWDWRM RSVGSLSGGE RQRVLLARAL AVQARVLLMD EPLANLDPPH
QADWLECVQA LVAQGRTVVS VLHEISMALQ AQDLVILDKG QVMHQGACAD AATHAALEAV
FEHRLRIRAI DGQWLALPRL RGQAAAP