Gene Daci_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2788 
Symbol 
ID5748364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3066902 
End bp3067303 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content67% 
IMG OID641297883 
Producthypothetical protein 
Protein accessionYP_001563811 
Protein GI160898229 
COG category[S] Function unknown 
COG ID[COG3027] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.899312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAGA TCGAAGTGCA AATCCTGCAG CAAAGCTATG TGCTGACCTG CCCCGATGGC 
CAGGAAGAGC GTCTGCTCGA GGCCGTGCGC CGTGTGGACA CGGCCATGAC CCGTATCCGC
GACAGCGGCA AGGTCCGCTC GCGCGAGCGC GTGGCCGTGC TGTCCGCGCT GAACATGGCC
TTCGACGTGC TGGACCGCGA AGCGCAGGAA AGCGCCATGG CCACGGCCCA GGCCGAAATG
CAGTCCCTGC ATGACGAGGT CACTTCGCAG CATGCCGCCC AGTCCCTGCC GCCCGAGCCC
AGCCCCGAGG AACTGGCCGA GCGCCAGCGC CAGCAGGCCC TTGCCGAGCA ACTGGTGCTG
CGCCTGGACC AGGCCCTGGA AAGCGATGCA CGGCTGCTCT GA
 
Protein sequence
MKQIEVQILQ QSYVLTCPDG QEERLLEAVR RVDTAMTRIR DSGKVRSRER VAVLSALNMA 
FDVLDREAQE SAMATAQAEM QSLHDEVTSQ HAAQSLPPEP SPEELAERQR QQALAEQLVL
RLDQALESDA RLL