Gene Daci_2784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2784 
Symbol 
ID5748360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3061114 
End bp3061830 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content73% 
IMG OID641297879 
Producthypothetical protein 
Protein accessionYP_001563807 
Protein GI160898225 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.484233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.649515 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTGT CGCTGCTCTG GACTGCTTTG ATCATGGGGC TCGTCGGCGG GCCCCATTGC 
CTTGCCATGT GCGCTGCGCC CTGCGGCGTG GTCACGGGCG GGGCGGGGCA GGGCGGCGGC
TCGCAGGTGG TGGCCGTGCA TGGATTGCAA AGCCGGCTGT GGCTGCGCAC GGCGCTGTTC
CACGGCGGCC GTCTGGCCGG CTATGCCAGC CTGGGCGCTG CCTCGGCCCT GGCCATGGAG
AGCCTGTCCT GGCTCACCAG CCAGACCACG GCGCTGCAGC CGTTCTGGAC ACTGACCCAT
GTCGCCGTGA TGGCCTGGGG CCTGGCCATG ATGGTGCAGG CCCGCCAGCC CGCCTGGCTG
GAGTCTGCCG GCCGCGCCGC CTGGCGGCGC GTGCAGCCCT GGGTGTCGGC GCCGGGCGGC
ACGCTGGCGG CAGGCTATGC CTGGGCGCTC ATGCCTTGCG GACTGCTGTA TTCGGCCGTG
CTGGTCGCCG CGCTCAGCGG CGGCCCGTTG CAGGGCGCGC TGGCCATGGC GGCCTTTGGC
GTGGGCAGCG GGCTGTGGCT GGTGGCCGGC CCCTGGCTGT GGCGGCTGGG CCGGCAGCGC
CTGAACGGCC TGCGCGCCGA ATGGGGCACG CGCCTGGCCG GCCTGATGCT GGTGGGCGTG
GCCGTGTGGG CGCTGTGGAT GGACCTGATC TACAAGCCCA GCCTCTGGTG CCGTTGA
 
Protein sequence
MLLSLLWTAL IMGLVGGPHC LAMCAAPCGV VTGGAGQGGG SQVVAVHGLQ SRLWLRTALF 
HGGRLAGYAS LGAASALAME SLSWLTSQTT ALQPFWTLTH VAVMAWGLAM MVQARQPAWL
ESAGRAAWRR VQPWVSAPGG TLAAGYAWAL MPCGLLYSAV LVAALSGGPL QGALAMAAFG
VGSGLWLVAG PWLWRLGRQR LNGLRAEWGT RLAGLMLVGV AVWALWMDLI YKPSLWCR