Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2756 |
Symbol | |
ID | 5748332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 3029184 |
End bp | 3031124 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641297851 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001563779 |
Protein GI | 160898197 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTGCC CCGGTGTGGG ACATAATTGC CACCCCGGGA GCCGAGCCTG CCGGTTGCTC GCTACTTTTG ACGATCCCAC GATGCCTACA TACCGTTCCA AGACTTCCAC CGGCGGCCGC AACATGGCTG GTGCGCGCGC CCTGTGGCGT GCCACCGGCA TGAAGGATGG CGACTTCGAC AAGCCCATCA TCGCCATCGC CAACTCCTTC ACGCAGTTCG TTCCGGGCCA CGTCCACCTC AAGGACCTGG GCCAGCTGGT GGCGCGCGAG ATCGAGGCCG CAGGCGGCGT GGCCAAGGAA TTCAACACCA TTGCCGTGGA CGACGGCATC GCCATGGGCC ACGACGGCAT GCTGTACTCG CTGCCCAGCC GCGACATCAT CGCGGACTCG GTGGAGTACA TGGTCAACGC CCACTGCGCC GACGCGCTGG TGTGCATCTC CAACTGCGAC AAGATCACCC CCGGCATGCT GATGGCCGCC ATGCGGCTGA ACATTCCGGT GATCTTCGTC TCCGGCGGCC CCATGGAAGC GGGCAAGACC AAGCTGGCCA ATCCCAACAC GCACAAGCTG GAGTTCAAGA AGCTGGACCT GGTCGATGCC ATGGTGATCG CGGCCGACTC CAACTACACC GACGAGCAGG TCGCCCAGGT CGAGCGCTCG GCCTGCCCGA CCTGCGGTTC CTGCTCGGGC ATGTTCACCG CCAACTCCAT GAACTGCCTG ACCGAGGCGC TGGGCCTGTC CCTGCCCGGC AACGGCACGG TGCTGGCCAC GCATGCCGAC CGCGAGGAAC TGTTCAAGCG CGCCGGCCGC CGCATCGTCG AGCTGGCCCG CGAGTACTAC GAGCAGGAAG ACGCCTCCGT GCTGCCGCGC TCCGTGGGCT TCAAGGCCTT CGAGAACGCG ATGACGCTGG ACATCGCCAT GGGCGGCTCC ACCAACACCA TCCTGCACCT GCTGGCCATT GCCCGTGAAG CCGAGATCGA CTTCACCATG GCCGACATCG ACCGCCTCTC GCGCTCCGTG CCCCAGCTGT GCAAGGTGGC GCCCAACACG CAGAAATACC ACATCGAGGA TGTGCACCGC GCCGGCGGCA TCTTCGCCAT CCTCGGCGAG CTGGCCCGCG CTGGCAAGCT GCACACCGAC GTGCCCACCG TGCATGCCAA GACCCTGGGC GAAGGCCTGG CGCAGTGGGA CATCACCACC ACCCAGGACG AGGCCGTCAG GCACTTCTAC CTGGCAGGCC CGGCCGGCAT CCCCACCCAG GTGGCCTTCA GCCAGAACAC GCGCTGGCCC AGCCTGGACC TGGACCGTGC AGAAGGCTGC ATCCGCTCCT ACGAGCACGC CTTCTCCAAG GAAGGCGGCC TGGCCGTGCT GACCGGCAAC ATCGCCCTGG ACGGCTGCGT GGTCAAGTCG GCCGGCGTGG ACGAAAGCAT CCACGTGTTC GAAGGCACGG CCCACGTGAC CGAGTCGCAG GACGAGGCCG TGCAGAACAT CCTGGACGAC AAGGTCAAGG CCGGCGACAT CGTCGTCGTG CGCTATGAAG GTCCCAAGGG CGGCCCCGGC ATGCAGGAAA TGCTCTACCC GACCAGCTAC ATCAAGTCCA AGGGCCTGGG CAAGGAGTGC GCACTGCTGA CCGACGGACG CTTCTCGGGC GGCACCTCGG GCCTGTCCAT CGGCCACTGC TCGCCGGAAG CTGCCGCTGG CGGCGCCATC GGCCTGGTGC GCAACGGCGA CCGCATCCGC ATCGACATTC CCAACCGCAG CATCAACGTG CTGGTCTCCG ACGAGGAGCT GGCCCGCCGC CGTGCCGAGC AGGATGCCAA GGGCTGGAAG CCCGCCGAGC CGCGCCCGCG CAAGGTCTCG GCCGCGCTCA AGGCCTATGC CAAGCTGGTG ATGTCGGCCG ACAAGGGCGC CGTGCGCGAC CTGTCCCTGC TGGACGACTG A
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Protein sequence | MLCPGVGHNC HPGSRACRLL ATFDDPTMPT YRSKTSTGGR NMAGARALWR ATGMKDGDFD KPIIAIANSF TQFVPGHVHL KDLGQLVARE IEAAGGVAKE FNTIAVDDGI AMGHDGMLYS LPSRDIIADS VEYMVNAHCA DALVCISNCD KITPGMLMAA MRLNIPVIFV SGGPMEAGKT KLANPNTHKL EFKKLDLVDA MVIAADSNYT DEQVAQVERS ACPTCGSCSG MFTANSMNCL TEALGLSLPG NGTVLATHAD REELFKRAGR RIVELAREYY EQEDASVLPR SVGFKAFENA MTLDIAMGGS TNTILHLLAI AREAEIDFTM ADIDRLSRSV PQLCKVAPNT QKYHIEDVHR AGGIFAILGE LARAGKLHTD VPTVHAKTLG EGLAQWDITT TQDEAVRHFY LAGPAGIPTQ VAFSQNTRWP SLDLDRAEGC IRSYEHAFSK EGGLAVLTGN IALDGCVVKS AGVDESIHVF EGTAHVTESQ DEAVQNILDD KVKAGDIVVV RYEGPKGGPG MQEMLYPTSY IKSKGLGKEC ALLTDGRFSG GTSGLSIGHC SPEAAAGGAI GLVRNGDRIR IDIPNRSINV LVSDEELARR RAEQDAKGWK PAEPRPRKVS AALKAYAKLV MSADKGAVRD LSLLDD
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