Gene Daci_2756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2756 
Symbol 
ID5748332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3029184 
End bp3031124 
Gene Length1941 bp 
Protein Length646 aa 
Translation table11 
GC content67% 
IMG OID641297851 
Productdihydroxy-acid dehydratase 
Protein accessionYP_001563779 
Protein GI160898197 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism 
COG ID[COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase 
TIGRFAM ID[TIGR00110] dihydroxy-acid dehydratase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTGCC CCGGTGTGGG ACATAATTGC CACCCCGGGA GCCGAGCCTG CCGGTTGCTC 
GCTACTTTTG ACGATCCCAC GATGCCTACA TACCGTTCCA AGACTTCCAC CGGCGGCCGC
AACATGGCTG GTGCGCGCGC CCTGTGGCGT GCCACCGGCA TGAAGGATGG CGACTTCGAC
AAGCCCATCA TCGCCATCGC CAACTCCTTC ACGCAGTTCG TTCCGGGCCA CGTCCACCTC
AAGGACCTGG GCCAGCTGGT GGCGCGCGAG ATCGAGGCCG CAGGCGGCGT GGCCAAGGAA
TTCAACACCA TTGCCGTGGA CGACGGCATC GCCATGGGCC ACGACGGCAT GCTGTACTCG
CTGCCCAGCC GCGACATCAT CGCGGACTCG GTGGAGTACA TGGTCAACGC CCACTGCGCC
GACGCGCTGG TGTGCATCTC CAACTGCGAC AAGATCACCC CCGGCATGCT GATGGCCGCC
ATGCGGCTGA ACATTCCGGT GATCTTCGTC TCCGGCGGCC CCATGGAAGC GGGCAAGACC
AAGCTGGCCA ATCCCAACAC GCACAAGCTG GAGTTCAAGA AGCTGGACCT GGTCGATGCC
ATGGTGATCG CGGCCGACTC CAACTACACC GACGAGCAGG TCGCCCAGGT CGAGCGCTCG
GCCTGCCCGA CCTGCGGTTC CTGCTCGGGC ATGTTCACCG CCAACTCCAT GAACTGCCTG
ACCGAGGCGC TGGGCCTGTC CCTGCCCGGC AACGGCACGG TGCTGGCCAC GCATGCCGAC
CGCGAGGAAC TGTTCAAGCG CGCCGGCCGC CGCATCGTCG AGCTGGCCCG CGAGTACTAC
GAGCAGGAAG ACGCCTCCGT GCTGCCGCGC TCCGTGGGCT TCAAGGCCTT CGAGAACGCG
ATGACGCTGG ACATCGCCAT GGGCGGCTCC ACCAACACCA TCCTGCACCT GCTGGCCATT
GCCCGTGAAG CCGAGATCGA CTTCACCATG GCCGACATCG ACCGCCTCTC GCGCTCCGTG
CCCCAGCTGT GCAAGGTGGC GCCCAACACG CAGAAATACC ACATCGAGGA TGTGCACCGC
GCCGGCGGCA TCTTCGCCAT CCTCGGCGAG CTGGCCCGCG CTGGCAAGCT GCACACCGAC
GTGCCCACCG TGCATGCCAA GACCCTGGGC GAAGGCCTGG CGCAGTGGGA CATCACCACC
ACCCAGGACG AGGCCGTCAG GCACTTCTAC CTGGCAGGCC CGGCCGGCAT CCCCACCCAG
GTGGCCTTCA GCCAGAACAC GCGCTGGCCC AGCCTGGACC TGGACCGTGC AGAAGGCTGC
ATCCGCTCCT ACGAGCACGC CTTCTCCAAG GAAGGCGGCC TGGCCGTGCT GACCGGCAAC
ATCGCCCTGG ACGGCTGCGT GGTCAAGTCG GCCGGCGTGG ACGAAAGCAT CCACGTGTTC
GAAGGCACGG CCCACGTGAC CGAGTCGCAG GACGAGGCCG TGCAGAACAT CCTGGACGAC
AAGGTCAAGG CCGGCGACAT CGTCGTCGTG CGCTATGAAG GTCCCAAGGG CGGCCCCGGC
ATGCAGGAAA TGCTCTACCC GACCAGCTAC ATCAAGTCCA AGGGCCTGGG CAAGGAGTGC
GCACTGCTGA CCGACGGACG CTTCTCGGGC GGCACCTCGG GCCTGTCCAT CGGCCACTGC
TCGCCGGAAG CTGCCGCTGG CGGCGCCATC GGCCTGGTGC GCAACGGCGA CCGCATCCGC
ATCGACATTC CCAACCGCAG CATCAACGTG CTGGTCTCCG ACGAGGAGCT GGCCCGCCGC
CGTGCCGAGC AGGATGCCAA GGGCTGGAAG CCCGCCGAGC CGCGCCCGCG CAAGGTCTCG
GCCGCGCTCA AGGCCTATGC CAAGCTGGTG ATGTCGGCCG ACAAGGGCGC CGTGCGCGAC
CTGTCCCTGC TGGACGACTG A
 
Protein sequence
MLCPGVGHNC HPGSRACRLL ATFDDPTMPT YRSKTSTGGR NMAGARALWR ATGMKDGDFD 
KPIIAIANSF TQFVPGHVHL KDLGQLVARE IEAAGGVAKE FNTIAVDDGI AMGHDGMLYS
LPSRDIIADS VEYMVNAHCA DALVCISNCD KITPGMLMAA MRLNIPVIFV SGGPMEAGKT
KLANPNTHKL EFKKLDLVDA MVIAADSNYT DEQVAQVERS ACPTCGSCSG MFTANSMNCL
TEALGLSLPG NGTVLATHAD REELFKRAGR RIVELAREYY EQEDASVLPR SVGFKAFENA
MTLDIAMGGS TNTILHLLAI AREAEIDFTM ADIDRLSRSV PQLCKVAPNT QKYHIEDVHR
AGGIFAILGE LARAGKLHTD VPTVHAKTLG EGLAQWDITT TQDEAVRHFY LAGPAGIPTQ
VAFSQNTRWP SLDLDRAEGC IRSYEHAFSK EGGLAVLTGN IALDGCVVKS AGVDESIHVF
EGTAHVTESQ DEAVQNILDD KVKAGDIVVV RYEGPKGGPG MQEMLYPTSY IKSKGLGKEC
ALLTDGRFSG GTSGLSIGHC SPEAAAGGAI GLVRNGDRIR IDIPNRSINV LVSDEELARR
RAEQDAKGWK PAEPRPRKVS AALKAYAKLV MSADKGAVRD LSLLDD