Gene Daci_2754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2754 
Symbol 
ID5748330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3026956 
End bp3028431 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content71% 
IMG OID641297849 
Producthistidine kinase 
Protein accessionYP_001563777 
Protein GI160898195 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGAGT CCAGCCCCCA CCTGCCCGGC TGGCGGCGCT GGTTTCGCCT GAGCCTGAAG 
CGCCAGGTGC TGATGCCCAT CGCCGCCCTC TGGGTGGCGT CCTTCTTCAT CGCCACCGGG
GCCGCCTACT GGCTTGCGGG ACGCAGCACC AGCGACGCCT TCGACCGGCT GCTGGCCGAT
GACGCCCGCG CACTGGCCGC GCAGTTGCGC TGGAAGGAGG GGCAGGCCTA TTTCGACGCC
AGCCGCGAAA TGGCCGACGC CCTGGTCTTC GACTCCCTGT CGCAGAACCA CTACGGCGTG
GTCACGGCCT CCGGCAGGCA GCTCATCGGA AGCCTTCCCC TGCCTCCTTT GCTGCAGCAG
GAGTCGGCTG CCGACGCAAG CCCCATGTTC TTCGGCCACC AGGCCGCCTC GGGCGCCGCC
CTGCGCGCCG TGGCGATCCT GGTCCGGCCC CAGGGCGGCG GCGAGCCCGT GTGGGTGGTG
GTTGCCGAGT CCAAGACCAA GCGGCGCCAG GTCAAGGACC AGATTGCCAC GGCCATCTTC
GTGCCTGCAG GGCTGGCCGG CTTCATCATC CTGCCGCTGA TCTACCACGG CATCCGCCGC
GGCCTGGCGC CTGCACGGCG CGTCAGCGCC CTGGTCGTGC AGCATGGCGA GAACGAGCTG
TCCCCGCTGT CCGTGGAAGA CGTGCCCGAG GAGCTGCGCG ACCTGGTCGC CCACACCAAT
GCGCTGCTGC TGAGGCTCAA GGCCTCCGTG GACGAGCAGC GCCGCTTCAT CGCCGATGCG
GCCCACCAGT TGCAAACGCC CATGGCGGGC ATACGCCTGC TGGTGGGCGA CATGCGGCGT
ACGCAGCATG CGGACCCGCA GCAGCCCATG GATGCCGAGG TGCTGGCCCA TCTCGACGAA
GTCGCGGCAC GCGGCGCACG CATGGTGCGC CAGTTGCTGG CCTATGCGCG CGCCGAGGAA
GAGTCCGTGG TCGAGGACCA GCTCTTCGAC GCGGCACAGG TCGCCCGGCA GGCGGCCCTG
CGCTGGCAGG ACCGTGCCGA TGCTGCCGGC CGCTCGCTCC GGATCGAGGG GCCGGAGCCG
GCTGCAACAG GCGGCGCCAG CACCGTGCGC GGCTCGCCCA CCCTGCTGGG CGAGGTGGTC
TCCAACCTGG TGGACAATGC GCTGCGCTAT GGCGGCCCCC ATGTCGCCGT GCAAACCCGG
GTGCAGGCGC ACGAGGACCT GGTCCGCATC CAGGTCAGCG ACGACGGCCC CGCGCTGGAT
GCGCAGACCC GTGCGCAGAT GCTGCTGCCC TTTTGGCGCG GCGACCATGG CCAGCCGGAA
GGCTCGGGCC TGGGCCTGTC CATCGCCCTG CGCGTGGTCC AGCGCATGGG CGGCCGGCTG
GCCGTGCACA GCGGCCCCGG CAGCAGGGGA ACCTGCGTCC AGATCGATCT GCCACGCCAG
CACGGCCCCA GCTTGGCCGA CGTAAAGCCA ACTTAA
 
Protein sequence
MTESSPHLPG WRRWFRLSLK RQVLMPIAAL WVASFFIATG AAYWLAGRST SDAFDRLLAD 
DARALAAQLR WKEGQAYFDA SREMADALVF DSLSQNHYGV VTASGRQLIG SLPLPPLLQQ
ESAADASPMF FGHQAASGAA LRAVAILVRP QGGGEPVWVV VAESKTKRRQ VKDQIATAIF
VPAGLAGFII LPLIYHGIRR GLAPARRVSA LVVQHGENEL SPLSVEDVPE ELRDLVAHTN
ALLLRLKASV DEQRRFIADA AHQLQTPMAG IRLLVGDMRR TQHADPQQPM DAEVLAHLDE
VAARGARMVR QLLAYARAEE ESVVEDQLFD AAQVARQAAL RWQDRADAAG RSLRIEGPEP
AATGGASTVR GSPTLLGEVV SNLVDNALRY GGPHVAVQTR VQAHEDLVRI QVSDDGPALD
AQTRAQMLLP FWRGDHGQPE GSGLGLSIAL RVVQRMGGRL AVHSGPGSRG TCVQIDLPRQ
HGPSLADVKP T