| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2751 |
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| Symbol | |
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| ID | 5748327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 3020986 |
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| End bp | 3022428 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641297846 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001563774 |
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| Protein GI | 160898192 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.124285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTACACGC ATGATCCGAA AGCGCCGCAT CGGCGCCTGT TCCTGGGCCT GGCGGGCGCC
TGCGTGCTGT CCCTCGCAGG CTGCGCCGTG GGCCCCGACT ATGCACGCCC TGCCGTGCCC
CGGGCCGACG CCCTGACCCG TGAGCCCCTG GCGACCGCCG GCCACAGCGG CCCGGTCCAG
CGCCAGTGGT GGAAGGCCTA TGGATCGCCC GAACTCGATG CACTGGTCCA GGAGGCGCTG
GAGCGCAGCC CCACCATCGA GGCCGCAACT GCGACATTGC GCGCCGCCAG GCAGAACGTC
ATCGCCCAGC GCGGCTTCTT CTATCCCACC GTGCAGCTGG GCTACAACCG CACGCGCCAG
AACACGGGCC AGTCGATGTC GCCTGCGCTC AACAGCGGCG AAACCCTCTA CAGCTACAAC
ACGGCCCAGT TGAGCATCAA CTACACGCCC GATATCTTCG GCGGCAACCG CCGCCAGGTG
GAGGGACTGA TGGCCAGCGA AGAAGGCCAG CGCCTGCAAC TGCAGGCCGC ACGGCTGACC
CTGGCGAGCA ACGTGGCGGG CGGCATGCTC CAGGCGGCCA TGCTTGCAGA GCAGGCCCAC
CTCATCGAGC AGGCCATTGC CGCTGCCCAG GAACAGTTGC GCCACATGCG GCTGCAGCAG
CGCAACGGCT ATGCCAGCGG GCTGGACGTG GCCACGCAGC AGACCCTGCT GGTGCAGATG
CAGCAGGCCC TGCCGCCGCT GCGCAAGGAA CTGGAGCAGA CACGCAACCT GCTGGCCACG
CTGGCCGGGC GCACGCCCGA CCAGGCCCCG GAGGTGCCGC CGCTGTCCTC CTTCTCGCAG
CCGCAGCTCC CGCAGGCCGT GGCCTCGGCG CTGGTGGAGC AGCGCCCCGA CGTACGCATT
GCAGAGACGG ATGTGCAGCA GGCCAGCGCC GCCATAGGCG TGGCCAGGGC AGCCCGCCTG
CCGCAGTTGA GCATCACTGC GGCCCTGGGC GGCGGCGCCA CGAGCTTTGC CAGAATGTTT
GCGGCGGGCA ATCCCACCTG GGCCCTGGGC GCCGGACTGC TGCAGCCCCT GTTCGCGGGC
GGCACGCTGC AGGCCCGTGA ACGCGCAGCA CAGGCCGAGT TCGATGCCGC CGCGGCCCGG
TACCGGGGCG CCGTGCTCTC ATCCTTCCAG GATGTGGCCA ATGCCCTCTA TGCGCTGGAC
ATCGATGCCA AGGCCGTGGA GATGGCGCAG GAAGGAGAAA AGGCCAGCCG GTCCACGCTG
GACCTCACGC GCACCCAACT GCGCAACGGC TACAGCGCCC AACCGGCCGC GCTGGCGGCC
GAACAATCCT GGCTCCAGGC CCGTGCCGCC CACGTCGCCG CGCGCGGCGC CTTGCTGGGC
GACACCGTGG CCCTGTACCA GGCCCTGGGC GGCGGCGTGC TGGCCAAGCC GCCGGCGGAC
TGA
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| Protein sequence | MYTHDPKAPH RRLFLGLAGA CVLSLAGCAV GPDYARPAVP RADALTREPL ATAGHSGPVQ
RQWWKAYGSP ELDALVQEAL ERSPTIEAAT ATLRAARQNV IAQRGFFYPT VQLGYNRTRQ
NTGQSMSPAL NSGETLYSYN TAQLSINYTP DIFGGNRRQV EGLMASEEGQ RLQLQAARLT
LASNVAGGML QAAMLAEQAH LIEQAIAAAQ EQLRHMRLQQ RNGYASGLDV ATQQTLLVQM
QQALPPLRKE LEQTRNLLAT LAGRTPDQAP EVPPLSSFSQ PQLPQAVASA LVEQRPDVRI
AETDVQQASA AIGVARAARL PQLSITAALG GGATSFARMF AAGNPTWALG AGLLQPLFAG
GTLQARERAA QAEFDAAAAR YRGAVLSSFQ DVANALYALD IDAKAVEMAQ EGEKASRSTL
DLTRTQLRNG YSAQPAALAA EQSWLQARAA HVAARGALLG DTVALYQALG GGVLAKPPAD
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