Gene Daci_2746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2746 
Symbol 
ID5748322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3016730 
End bp3017338 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content63% 
IMG OID641297841 
Producthypothetical protein 
Protein accessionYP_001563769 
Protein GI160898187 
COG category[S] Function unknown 
COG ID[COG2862] Predicted membrane protein 
TIGRFAM ID[TIGR00645] conserved hypothetical transmembrane protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.574002 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC AGCAAAACTC CAATCGAGCC CCCGGCTCCC CCCTGCGTCC CCTGCCTTCC 
CTGATCTTCG CCAGCCGCTG GCTGCAACTG CCGCTGTACC TGGGCCTGAT CGCCGCCCAG
GGTGTCTACG TCTGGCACTT CCTGCTCGAG TTGTGGCACC TGATCGAGGC CGCCTTCGGC
AACCAGGAAG CGCTGCAGGC GCTGATCACC AGCATCGGCT ACAAGCACGA TGCGCCCATC
GGCGCGCTCA ACGAAACCAT CATCATGCTG GTGGTGCTGG CGCTGATCGA CGTGGTGATG
ATCTCCAACC TGCTGATCAT GGTCATCGTG GGCGGCTACG AGACCTTCGT CAGCCGCCTG
GGCCTGGACA GCCACCCCGA CCAGCCCGAG TGGCTGGGCC ACGTGAACGC CTCCATCCTC
AAGGTCAAGC TGGCCCTGTC CATCATCGGC ATCAGCTCCA TCCACCTGCT CAAGACCTTC
ATCAACGCGG GCAGCTACGA CGTCAAGGTG CTGATGTGGC AGACCATCAT CCACGTCACC
TTCCTGGCCA GCGCCCTGGC CATCGCCTAC ACCGACAAGC TGATCAACAG CACGGCCAGC
AACCACTGA
 
Protein sequence
MARQQNSNRA PGSPLRPLPS LIFASRWLQL PLYLGLIAAQ GVYVWHFLLE LWHLIEAAFG 
NQEALQALIT SIGYKHDAPI GALNETIIML VVLALIDVVM ISNLLIMVIV GGYETFVSRL
GLDSHPDQPE WLGHVNASIL KVKLALSIIG ISSIHLLKTF INAGSYDVKV LMWQTIIHVT
FLASALAIAY TDKLINSTAS NH