Gene Daci_2744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2744 
Symbol 
ID5748320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3014164 
End bp3015300 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content64% 
IMG OID641297839 
Producthypothetical protein 
Protein accessionYP_001563767 
Protein GI160898185 
COG category[S] Function unknown 
COG ID[COG4804] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGA AGGCGCCTGC GATGGCGGGA GTCGCACCCG CCGCCGTGCC TGCCGGCTAC 
GCCGGCATCC ACGGCGGCAT CGTGGATCTG CTCGATGCCG CGCGCCAGAC GGCAGCGCGC
AGCGTCAATG CGCTGATGAC GGCCAGCTAC TGGGAGATTG GCCGCCGCAT CGTGGAGGCC
GAGCAACAGG GCAAGCGGCG CGCGGGTTAT GGCGAGCAGT TGATCGAGCG GCTGGCAAGC
GACCTCACCC AGCAGTTCGG CCGTGGCTTC AGCCGTCAGA ACCTGCAGCA GATGCGGTCG
TTTTTTCTGA CCCGGCCAAT TCGCCAGACA GTGTCTGGCG AATCTTCCCC GGAGCCAGTG
CGGCCTTGGC GGCTGGACGA GCTGGCGCAG GTCTTCACGC TGCCGTGGTC GGCCTATGTG
CGGCTGTTGT CGGTCAAGGA CGAGCATGCG CGCCAGTTCT ATGAAGCCGA GGCCTTGCGC
GGCGGCTGGA GCGTGCGCCA GTTGGATCGG CAGATCGGCA GCCAGTTCTA CGAGCGCACG
GCGCTGTCGA AAAACAAGGC GGCGATGCTG GCCAAGGGCG CGGTGGCCAA GCCCGAAGAT
GCCGTCGCGC CCGGCGATGC CATCAAAGAC CCCTATGTGC TGGAGTTCCT CGACCTCAAG
GACGAGTATT CGGAGTCCGA TCTGGAGGCC GCCTTGATCC GGCGGCTGGA AGACTTCCTG
CTCGAATTGG GTGAAGGGTT CACCTTCATT GGACGGCAGC GGCGCTTGCG CATCGACCAG
ACCTGGTATC GGGTGGACTT GCTGCTGTTC CATCGCAAGT TACGCTGCCT GGTCATCATC
GACCTGAAGC TGGGGAGTCT GACGCATGCG GACGTAGGCC AGATGCACAT GTACTGCAAC
TATGCCAAGG AACACTGGGC CTATCCCGAG GAGAACCCGC CGGTGGGGCT GATTCTTTGT
GCCGACAAGG GGCTCGCCCT GGCGCGGTAT GCGCTGGAGG GCTTACCCAC CAAGGTCATG
GCGGCGAACT ACCGGATGGT TCTGCCGGAT ACCGATGTGC TGCAAAAGGA ACTGGAAAGC
ACGCGGCTCT TGCTAGAGTC TCGCGGAACG ATTCGTCCCA AGACGTGGAA GCGGTAG
 
Protein sequence
MTKKAPAMAG VAPAAVPAGY AGIHGGIVDL LDAARQTAAR SVNALMTASY WEIGRRIVEA 
EQQGKRRAGY GEQLIERLAS DLTQQFGRGF SRQNLQQMRS FFLTRPIRQT VSGESSPEPV
RPWRLDELAQ VFTLPWSAYV RLLSVKDEHA RQFYEAEALR GGWSVRQLDR QIGSQFYERT
ALSKNKAAML AKGAVAKPED AVAPGDAIKD PYVLEFLDLK DEYSESDLEA ALIRRLEDFL
LELGEGFTFI GRQRRLRIDQ TWYRVDLLLF HRKLRCLVII DLKLGSLTHA DVGQMHMYCN
YAKEHWAYPE ENPPVGLILC ADKGLALARY ALEGLPTKVM AANYRMVLPD TDVLQKELES
TRLLLESRGT IRPKTWKR