Gene Daci_2740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2740 
Symbol 
ID5748316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3008886 
End bp3011141 
Gene Length2256 bp 
Protein Length751 aa 
Translation table11 
GC content60% 
IMG OID641297835 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001563763 
Protein GI160898181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.493167 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCA CCATCGCAGA CGCACTGCAT CAACTTCAGC GGCATCGAGG CCTTATCCGC 
GTTGGCGAGC CAAGGACAAC TGGTGCATCG ACGGAGATTG AAGTCGATGT TGCGGTCCAA
CTGCCGAACA GGTCTCGGCG CAATGGTATC TCTGAGACCG GAGTGCGCAC CGTCGAGACG
TGCGTGCTGG TATTCGGTAG TGACTGGCCC CTGTCTGCAC CCGAGCCCTT CTTACGTGCG
GACTTCCCGC TCAACTTGCC GCACATCAAC CCCCATCGCC AAGGCGAGTT AGTCTCGCCG
TGCCTATTCG AAGGGTCGTT GAACGAGCTG CTGCATCGGT TTGGCCTGGA CGCCGTTGTC
GATCAGTTGA TCGACTGGCT GCACAAGGCC GCGGCCGGAA CACTCCTGGA CCTGGAGCAG
GGGTGGGAAC CAACGCGCCG AGACAGCTGT CCTTCGACCG TTGTATTCAG TGCCGAGAAG
GTCGCGGCCG CCGCTCCCGC TGACGGCACG ATTCTGGTGG TTCCCGCAGG CTACGTGACG
ATCGATGGCG GTCTGTACGC CATCATCAAC GCCGAACTGA CCGCACAAGT CGATCCTGTG
TTTTATCAGG ATGTTCACAA CGACAAGCTG GGCAAATGGG GGAACGGCCA TGCCGCGGCC
TTCATCGCGC GCGCTCCGAT GACCGACGGC CTCCCGCATG TGATCGGACG CTATCAACCA
GAGACAGTTG TCGATCTCGC GACGCTGCTC GATCGAGCAG CGGAGCTTGG TATTGATCGC
GACGCTTTGG CCCAGGAAGT GGACGGTTAT TTCGGACGCT CAATCCTGGA TATGCGACAG
GACTCGCATG GCTGGGTGCA TGGTTTGTAC GCGATTGTGA TTCTGGCTGT GCAAAGGCCA
GCGTCGCTTG TGGGCTCGCC AGGGAGGAGT GTCGAGGTAT TGCCCTATGT GGTGCGCTAT
GAACTCAACG CTCAATCGCT CCTGGAGCGT AACGCCACGG TTCACCCGGC CTTTCACGCG
CATGCGTTGT CTCCTGAACT GCTGGCAAGG ACGTCCGGCA TTCCATACGC AGCCACATCA
CAGCCGCTGG TCGTGCTCGG CTGCGGAAGC GTGGGATCGA AAGTCGCGAT GCAACTGGGG
CGAGCGGGCT TTGGTTCGAT GACTTTCGTC GACAACGAAC CCATGTCGCC TCACAACGCC
GCGCGGCATG CACTCATTGA GCGGGCATCA GTTCTGGTTC CGCCTCGGAA GTCGGCGCTG
ATGAAGACAG CCTTTGAATC GCTGTCGCAT CTTCAATCGC GAGCGTTCGA CACCGACGCA
GTGACTCTTT TGGTCGATCC GGAACAGTTT GCGGCAACCG TTCCGCAGGA TGCGGCCCTC
ATCGTGGATG CGACGGCGTC ACTTCAGGTG CTGGCTGCAG AAACACAATC GGCAGCGTTG
GATCAATCCC CAGCCCGATT GGCACGGATC GCGATGTATG GTCAGGGGCG CTGTGTGGCG
GTATTGCTCG AAGGAGCTGG CCGTGCCGGC CGAGTTGACG ACCTCACGGC GTTCTTGTTC
GAGTGCTGCC GGTTTGCACC GGAACTGCGT GCGTCGATTG CCGGCGAGAC GTCTGAGCCG
ACTCGGATTT TCGTGGGTGA CAACTGTCGT TCGCTGACGA TGCCTATGTC TGACGCCGTT
GTTTCGCGGT CGACGTCACT GGCCGGCCTG CAACTGGAAC GATGGCTCGT TGATGGGCTT
CCGAAGGAAG CGACGCTTTG CGCCGGAATC TCAGATGCCG AAGGCCTTGG AATGGCATGG
ACCCGCGCCA GCCTTGGCCC GACCACTGCG CTTGAAGTCG CAGACGATGG TGGCTGGAAC
ATTCGGGTCC TGTCCCCAGT TGCGCAAGCA ATCCATGCTG ATGCGCTGCG CTGGGGTGCT
CTGGAAACAG GCGGCGCCTT GATCGGCCGC ATCTCGTTTG AAAATCGAAC CATCACCATT
GCAGGCCTTG TTGAGGCACC GCCTGACAGT GTTCGAGAGG CCGCCCGCTT CGTCCTCGGA
ACCAACGGGC TTGTTCAAAA TTTGCGCGCC GCAAACGCGG CCTCTTTGGG GTATCTCGCC
TTTATAGGAA CGTGGCACAG CCACCCGAAA GGCGGCGCAC ATTCGGGTAT CGACCGAAAT
ACATTGCGCG GCATCGCCGA GGATGCTGGC GGCCTTCCGG CCGTGTCGTT GGTATGGACT
CCGACAGGAC TCACGTGTGC GGTGGATCGC TGGTAG
 
Protein sequence
MTGTIADALH QLQRHRGLIR VGEPRTTGAS TEIEVDVAVQ LPNRSRRNGI SETGVRTVET 
CVLVFGSDWP LSAPEPFLRA DFPLNLPHIN PHRQGELVSP CLFEGSLNEL LHRFGLDAVV
DQLIDWLHKA AAGTLLDLEQ GWEPTRRDSC PSTVVFSAEK VAAAAPADGT ILVVPAGYVT
IDGGLYAIIN AELTAQVDPV FYQDVHNDKL GKWGNGHAAA FIARAPMTDG LPHVIGRYQP
ETVVDLATLL DRAAELGIDR DALAQEVDGY FGRSILDMRQ DSHGWVHGLY AIVILAVQRP
ASLVGSPGRS VEVLPYVVRY ELNAQSLLER NATVHPAFHA HALSPELLAR TSGIPYAATS
QPLVVLGCGS VGSKVAMQLG RAGFGSMTFV DNEPMSPHNA ARHALIERAS VLVPPRKSAL
MKTAFESLSH LQSRAFDTDA VTLLVDPEQF AATVPQDAAL IVDATASLQV LAAETQSAAL
DQSPARLARI AMYGQGRCVA VLLEGAGRAG RVDDLTAFLF ECCRFAPELR ASIAGETSEP
TRIFVGDNCR SLTMPMSDAV VSRSTSLAGL QLERWLVDGL PKEATLCAGI SDAEGLGMAW
TRASLGPTTA LEVADDGGWN IRVLSPVAQA IHADALRWGA LETGGALIGR ISFENRTITI
AGLVEAPPDS VREAARFVLG TNGLVQNLRA ANAASLGYLA FIGTWHSHPK GGAHSGIDRN
TLRGIAEDAG GLPAVSLVWT PTGLTCAVDR W