| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2716 |
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| Symbol | |
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| ID | 5748292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2986644 |
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| End bp | 2989025 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641297811 |
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| Product | hypothetical protein |
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| Protein accession | YP_001563739 |
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| Protein GI | 160898157 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3843] Type IV secretory pathway, VirD2 components (relaxase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.322654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTCGC GCGTGCAGTG CGAGCGCATC CGCGCTGCAC TTCGCGCTGC CTCCGGCGCA
GCCGTCCCAC GTGCAGGCGT CTTGCCTCGA ACACGGCTGG CCTGCGGCCA TTGCCGTGTT
CGCCGGTGCG CTGGCTGCTG GTGCAGCCTT GCCACCGGGC CGCAGTTGCC GGGATCGAGA
ACCTGGGGGA CAGGGGGAGG CAAATGCGGA AGGCAAGACA AAAGGGGGCG GCACCTGTCG
GCCCGCAAAG CCTGTCTGCA CGTGGGGGTG GCGCGGCACG GCGCGGCTTC GCCGCCGTGC
CGCTTGGGGC GCGAGGCCCG CGCCGGTACA GGCATGTCCG CGTGCTTTGC ACGACCGGAC
ACGCCACAGC CTTCAGGGAG CGCAGCCATG AGCAACCGCC GCGATGAAGA TTTCCGCATC
CGCCCCAGCG CCCCGAAGAA CCGAGGCAAG GGCCAAGGTC AGAGCTTCGT TTCCAAGGTA
CTCAAGCAGG CAGGCAAGGC CAGCAGCGGC AAGTCCTCAG TGCGCCGTCC AGGCGGAACC
GGCAAGGGCG CGGACACCGG CCAGCGGCCC GGTTCGCGCC TGGGGCGCGG CCACACGGCG
GCGCGCTTCG CGGGGGCGAA GCTCACGCCC ATGTCGCGGC GCGTGACCAT CAAGACGCTG
CTGGTCAACC AGCGCCAGGC CAGCCCGCAG TCGCTCGCCA AGCACCTGCG CTACATCGAG
CGCGATGGCG TGGGCCGCGA TGGCGAGCCG GGCCAAGCCT ACGGGCCGCA GACCGATGCC
GCCGACCTCG ACGCCTTCAA GGAACGCTGC GCCGACGACC GACACCATTT CCGCTTCATC
CTCTCGCCCG AGGATGGCGC CGAGCTGGAA GACCTGCGCA CCTACACGCG GCACCTCATG
GGCCGCATGG AAGCCGACCT GGGCACGGGC CTCGATTGGG TGGCCGTCAA CCACTGGAAC
ACCGACAACC CGCACACGCA CATAGTCGTG CGCGGGCGCG ACGACACCGG CAAAGACCTC
ATCATTGCGG GCGACTACAT CGCCGATGGC TTCCGCCATC GCGCCGCCGA GCTGGCGACC
GAATGGCTGG GGCCGCGCAC CGAGCTGGAG ATCCAGCAGA CCTTGCAGCG CGAGGTGAAG
CAGGAGCGGT GGACGAGCCT GGATCGCACC CTGCAACGCG AGGCCGGCGA CGACGGCCGA
GTGCAGATCG AACGCTTCAA CGAACCGAGA CTGCAACGCC AGCGCCTGTT GCTGGTTGGC
CGGCTGCAAC GCTTGCAGCG CCTGGGCCTG GCCGACGAAA TGCAGCCCGG CACCTGGGCC
GTCCACGCCG ACGCGGGAAA GACCCTGCGC ACCCTGGGCG AGCGTGGCGA CATCATCCGC
ACCATGCAGC GGGCCATGCG CGGCGAGCCG CGCGAGCTGG CAGTGTTCGA GCCGGGCGAC
GATGGCCGAA CCATTCTCGG GCGCGTAGCC GCGAAGGGGC TGGCCGACGA GCTGCGCGAC
CGGGGCTATC TGGTCATCGA CGGCGTGGAC GGCAAGGCCC ACTACGTCGC GCTCAATGCC
CGCGACGAGC TGGCGAACTA TCCGACCGGC GCCGTGGTGG CGGTGAAGGG ATCGGCCGAC
GTGCGTGCGG CCGACAAGAA CATCGCCGCA CTGGCGAGCG GTGGCCTGTA CCGCACCGAC
CATCATCTGG CCGTCGCGCA GGGGCAGACA GTGCCGGGCC GTGATCCGCA GGAAGTCGTC
GCGGTCCACG TCCGCCGGCT GGAAGCCCTG CGCCGCGCCG GCATCGTGGA GCGCGTGGCC
GAGGGACTTT GGAAGGTGCC GGACGACCTG GCCGAACAGG GCCGCCGCTA CGACGCGCAG
CGTCTGGGCG GCGTGGCGGT GGAACTGAAA TCGCACCTGC CCATCGAGCG GCAGGCCCGC
GTGATTGGGG CCACTTGGCT CGACCAGCAA TTGATCGGCG GCGGCTCGGG CCTGGGCGAC
CTCGGCTTTG GCAGCGAGGC CAAACAGGCG ATGCAGCAGC GCGCCGACTT CCTGGCCGAA
CAGGGATTGG CCGTGCGGCG CGGCCAGCGC GTGATCCTGG CGCGCAACCT GCTGGGCACA
CTGCGCAACC GGGAACTGGC GCAGGTCGCC AAAGACATTG CGGCCGAAAC TGGCTTGGAG
CATCGACCCG TGTCCGATGG GCAGCGCGTG GCCGGCATCT ACCGGCGCTC CGTCATGCTT
GCCAGCGGGC GCTACGCGAT GCTCGATGAC GGCATGGGGT TCAGCCTGGT GCCGTGGAAA
CCGGTGATCG AGCAGCGAAT GGGGCAGCAG CTTGCCGGGA CGGTGCGCGG CGGCGCGGTG
TCATGGGAGA TTGGGCGGCA TCGGGGGCCA ACCATTTCTT GA
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| Protein sequence | MSSRVQCERI RAALRAASGA AVPRAGVLPR TRLACGHCRV RRCAGCWCSL ATGPQLPGSR
TWGTGGGKCG RQDKRGRHLS ARKACLHVGV ARHGAASPPC RLGREARAGT GMSACFARPD
TPQPSGSAAM SNRRDEDFRI RPSAPKNRGK GQGQSFVSKV LKQAGKASSG KSSVRRPGGT
GKGADTGQRP GSRLGRGHTA ARFAGAKLTP MSRRVTIKTL LVNQRQASPQ SLAKHLRYIE
RDGVGRDGEP GQAYGPQTDA ADLDAFKERC ADDRHHFRFI LSPEDGAELE DLRTYTRHLM
GRMEADLGTG LDWVAVNHWN TDNPHTHIVV RGRDDTGKDL IIAGDYIADG FRHRAAELAT
EWLGPRTELE IQQTLQREVK QERWTSLDRT LQREAGDDGR VQIERFNEPR LQRQRLLLVG
RLQRLQRLGL ADEMQPGTWA VHADAGKTLR TLGERGDIIR TMQRAMRGEP RELAVFEPGD
DGRTILGRVA AKGLADELRD RGYLVIDGVD GKAHYVALNA RDELANYPTG AVVAVKGSAD
VRAADKNIAA LASGGLYRTD HHLAVAQGQT VPGRDPQEVV AVHVRRLEAL RRAGIVERVA
EGLWKVPDDL AEQGRRYDAQ RLGGVAVELK SHLPIERQAR VIGATWLDQQ LIGGGSGLGD
LGFGSEAKQA MQQRADFLAE QGLAVRRGQR VILARNLLGT LRNRELAQVA KDIAAETGLE
HRPVSDGQRV AGIYRRSVML ASGRYAMLDD GMGFSLVPWK PVIEQRMGQQ LAGTVRGGAV
SWEIGRHRGP TIS
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