Gene Daci_2712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2712 
Symbol 
ID5748288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2982268 
End bp2982975 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content63% 
IMG OID641297807 
Producthypothetical protein 
Protein accessionYP_001563735 
Protein GI160898153 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.808274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAT TTCACCACCG CGCCCACCCT GAAAGTCACC GCACTGAACA TATCGGATGG 
CTGCGCGCCG CTGTTCTGGG TGCCAATGAC GGCATCATTT CCACGGCCAG CCTGGTTGCA
GGCGTGGCTG CTGCCCATGC AAGCCATGCC AGCATCATGA CCACGGCCAT CGCGGGGTTG
GTAGCCGGTG CCATGTCCAT GGCTGCAGGC GAGTTCGTGT CGGTCTATTC ACAAGCTGAT
ACGGAGAAGG CGGATTTGGC GCGGGAACGT GATGAACTGG AAAACAGTCC GGAAGCAGAG
CATCGGGAAC TAACGGCCAT CTATGTCCGG CGTGGCCTGG ATCATCGACT CGCGGATCAG
GTCGCCACGC AATTGATGGC GCATGATGCG CTGGGCGCGC ACGCGCGCGA TGAATTGGGC
ATTTCTGAAA CCTTGAGCGC TCGCCCGCTG CAAGCCGCCA TGGCGTCCGC TGGGAGCTTC
GCGGTGGGTG CGGCCATGCC GCTGGCCGTG GTTCTGTTGG CGCCGGAGCA GAGCCTGCTC
TATTGGATCG TCGCGACGGC GATTGTCTTC CTGGCCCTTC TCGGCGCTGC GGCCGCTGCC
GTGGGTGGTA CGCCGCTCTT CAAAAGTGCG CTGCGCGTCG CGTTCTGGGG CACATTTGCC
ATGGCGGTGA CAGCGGGCGT GGGAGCCATG TTCGGCACTG CGGTGTAG
 
Protein sequence
MTKFHHRAHP ESHRTEHIGW LRAAVLGAND GIISTASLVA GVAAAHASHA SIMTTAIAGL 
VAGAMSMAAG EFVSVYSQAD TEKADLARER DELENSPEAE HRELTAIYVR RGLDHRLADQ
VATQLMAHDA LGAHARDELG ISETLSARPL QAAMASAGSF AVGAAMPLAV VLLAPEQSLL
YWIVATAIVF LALLGAAAAA VGGTPLFKSA LRVAFWGTFA MAVTAGVGAM FGTAV