Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2712 |
Symbol | |
ID | 5748288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2982268 |
End bp | 2982975 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641297807 |
Product | hypothetical protein |
Protein accession | YP_001563735 |
Protein GI | 160898153 |
COG category | [S] Function unknown |
COG ID | [COG1814] Uncharacterized membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.808274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAAAT TTCACCACCG CGCCCACCCT GAAAGTCACC GCACTGAACA TATCGGATGG CTGCGCGCCG CTGTTCTGGG TGCCAATGAC GGCATCATTT CCACGGCCAG CCTGGTTGCA GGCGTGGCTG CTGCCCATGC AAGCCATGCC AGCATCATGA CCACGGCCAT CGCGGGGTTG GTAGCCGGTG CCATGTCCAT GGCTGCAGGC GAGTTCGTGT CGGTCTATTC ACAAGCTGAT ACGGAGAAGG CGGATTTGGC GCGGGAACGT GATGAACTGG AAAACAGTCC GGAAGCAGAG CATCGGGAAC TAACGGCCAT CTATGTCCGG CGTGGCCTGG ATCATCGACT CGCGGATCAG GTCGCCACGC AATTGATGGC GCATGATGCG CTGGGCGCGC ACGCGCGCGA TGAATTGGGC ATTTCTGAAA CCTTGAGCGC TCGCCCGCTG CAAGCCGCCA TGGCGTCCGC TGGGAGCTTC GCGGTGGGTG CGGCCATGCC GCTGGCCGTG GTTCTGTTGG CGCCGGAGCA GAGCCTGCTC TATTGGATCG TCGCGACGGC GATTGTCTTC CTGGCCCTTC TCGGCGCTGC GGCCGCTGCC GTGGGTGGTA CGCCGCTCTT CAAAAGTGCG CTGCGCGTCG CGTTCTGGGG CACATTTGCC ATGGCGGTGA CAGCGGGCGT GGGAGCCATG TTCGGCACTG CGGTGTAG
|
Protein sequence | MTKFHHRAHP ESHRTEHIGW LRAAVLGAND GIISTASLVA GVAAAHASHA SIMTTAIAGL VAGAMSMAAG EFVSVYSQAD TEKADLARER DELENSPEAE HRELTAIYVR RGLDHRLADQ VATQLMAHDA LGAHARDELG ISETLSARPL QAAMASAGSF AVGAAMPLAV VLLAPEQSLL YWIVATAIVF LALLGAAAAA VGGTPLFKSA LRVAFWGTFA MAVTAGVGAM FGTAV
|
| |