Gene Daci_2711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2711 
Symbol 
ID5748287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2981675 
End bp2982226 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content59% 
IMG OID641297806 
Productcytochrome B561 
Protein accessionYP_001563734 
Protein GI160898152 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTCA GGAATTCCGA ATACCGTTTC AGTCCTTTGG TCATAGGACT GCATTGGCTG 
ACTGTGCTTC TCATCATCGC GGTCTATGCG AGCATGGAGC TGCGCGGACT GGCACCCAAG
GGCGCCTTGA GAGACGCCAT GAAGTCCTTG CACTACCTGC TGGGCCTCAG CGTTCTGGTG
ATCGTCGTGA TCCGTATCGG GGTGCGCATC CAGGCGGGCG TGAAGCCCGC GATCCAACCA
CCCATGCCAC GCTGGCAGGC CACGCTCGCC GATGTCATGC ACTATGCGCT CTACAGCTTC
ATGCTCGCCA TGCCGCTGCT CGGATGGCTC ACCTTGAGTG CGGCGGGCAA GCCGATTGTT
CTGTTTGGCT TGCCCATTCC CTCTCTGATC GGCACCGACG TTGCTTTGTC GCGCCAACTC
AAGGATGTCC ATGAGGCGCT GGCGACATTG GGCTATGTCT TGATCGGATC GCATGCGATG
GCGGCGCTGT TGCACCACTA CGTCATGCGT GACAACACAC TGGTTCGCAT GCTTCCCGGT
CGTCGCCCCT GA
 
Protein sequence
MNVRNSEYRF SPLVIGLHWL TVLLIIAVYA SMELRGLAPK GALRDAMKSL HYLLGLSVLV 
IVVIRIGVRI QAGVKPAIQP PMPRWQATLA DVMHYALYSF MLAMPLLGWL TLSAAGKPIV
LFGLPIPSLI GTDVALSRQL KDVHEALATL GYVLIGSHAM AALLHHYVMR DNTLVRMLPG
RRP