| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2709 |
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| Symbol | |
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| ID | 5748285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2977032 |
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| End bp | 2980127 |
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| Gene Length | 3096 bp |
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| Protein Length | 1031 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297804 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001563732 |
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| Protein GI | 160898150 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTCCC GTCTGATTGA ATTTTCCCTG CGCCAACGTG CGCTGGTACT GCTTGGCGTG
CTGGCTTTGG CGGGTGCGGG CCTGGCGGCC TTCCTGCAAC TGCCGATCGA CGCCTATCCG
GACATTTCCC CAACGCAGGT CAAGCTGATT ATCAAGGCCC CTGGCATGAC GCCCGAGGAG
GTGGAGTCGC GCGTGATCAC GCCGCTGGAG ATGGAGTTGC TCGGCGTGCC GCGGGGCGTG
ATGCTGCGCT CCACGGCCAA GTACGCCATC GCCGACATCA CGCTGGACTT CGCCGAAGGC
AGCGACATCT ACTGGGCGCG TCAGCAGGTG GCTGAACGCT ATGCCGGTGT TTCGGGCAGT
CTGCCCGACG GCGTCAGCGG CGGGCTGGCA CCGATTTCGA CGCCGCTGTC AGACGTGTTC
ATGTTCACCA TCGAAGGCGG CAGCCTCACG CTGAGCGAGC GGCGCGCCCT GCTGGACTGG
ACGCTGCGCC CGGCCCTGCG CACGCTGCCC GGCGTTGCCG ATGTCAACGT GCTGGGCGGC
GAAGCCAAGA GCTTTGCCGT GGTGCCTGAT CGCGCGCGGC TTTCCGCTGC GGGCCTCGGC
TTCTCGGACG TCATCACTGC GATCGGCCGC AACAACCGCA ACGACGGCGC GGGCCGCCTG
GATGCGGGCG AGGACACGCT GATCGTGCGC GCCGAAGGCG CGATCCACAC TTTGGACGAT
TTATCCCGTC TGATCCTGCG CGCGGGGGCC AATGGCACGG CCCCAGTTCG CCTGGGCGAC
GTGGCCCAGG TGCGCATCGA AGGCGTGACT CGCTATGGCG CAGTCACCCG GGACGGCGCG
GGCGAAGCGG TGGAAGGCAT CGTGGTGGCG CTGCGCGGGG CCGATGCTTC GGCGCTCGTG
AAGGCCATTC GCGCCCGGCT GGACGAGGTG GCTCCCAGCC TGCCGCCCGG CGTCAAGGTG
GTGCCGTTCT ATGACCGCAG CACGCTGATC GAGCGCGCCG TGGGCACGGT GGAAAGCGCC
TTGCTGGAAG CGACGGTACT GGTCGTCATC CTGCTGCTTC TGTTCCTCGG CGAGCTTCGC
GCCGCGCTGG TGGTGGCGGT GATGGTGCCT TTGGCGGCGC TGGGTACCTT CTTGCTGATG
CGCCTTGTCG GCATGAGCGC CAACCTGATG AGCCTGGGTG GGCTCGCAAT CGCCATCGGC
ATGCTGGTGG ATGCTGCCGT GGTGGTGGTG GAAAACGCCG TCAGTCGGCT CGACCCGCAC
GCGCCCAGTG CGCACCAGCC GCGCCTGCAC CGCATATTCG CCGCGGCGCG CGAGGTCGCC
ATGCCTGTGG CCTCGGGCAT CCTCATCATC TGTCTGACCT TCATGCCCCT GCTCACGCTG
CAAGGGTTGG AAGGCAAACT GTTTGTGCCG GTGGCGCTGA CCATCGTGTT CGCCCTGGGC
GTCTCGCTGC TGCTGTCGCT CACGCTGGTG CCGGTGCTGG CCTCGCTGCT CCTCAAGGAA
CACGCGCACA CCGAGCCGTG GGTGATGCGC TGGGCCACGC GCCTGTACCA ACCGCTGCTG
GAGGCTGCGC TTCACCACCC GCTACGCGCA TCGGCGGTCG CTATCGCGGC CCTGGCATTG
GGTGTGGTGG CCTACCTCGG CACGGGCAAG GCGTTCATGC CGACGATGGA TGAGGGCGAT
ATCCTGCTGC AACTGCAAAA GCCGCCGTCC ATTGGGTTGC AGCGCTCGCT GGAGATTGAC
CTGGCGGTGC AGAAGGCCAT CGGTGCGGCG GTGCCCGAGG TGCGGCACAG CATCGGGCGG
GTGGGCTCGG ACGAGCTGGG GCTCGACCCG ATGGGCCTGA ACGAAACCGA CCTGTTCATG
CAGCTCGCAC CGCGCAAGGA TTGGCATGCA GCCGACAAGG ACGCGTTGAG TGCCGAGATA
CGCAAGGTGA TGGATGCCTT CCCCGGCCTG GAATTCGGCT TTACCCAGCC CATCGAGATG
CGCATCTCGG AAATGCTCAC CGGCAGCCGG GGCGACGTGG CCGTCAAGCT GTTCGGCCCT
GATCTGCAAA CGCTGGGCGA TCTGGCGCAG CGCATGGCCG CTCGCATCGA GAAAGTGCCC
GGTGTGCGCG ACGTGCTCAC CCAGGCCAGC GACAGCGTGG AATACCTGCA GGTGAAGGTG
GATGCGCAGG CGGCCGGTCG CGCCGGACTG GCCGTGACGC AGGTTCAGGA CGAGCTGCGT
GCGCAGCTCG AAGGCGTGCC GGCCGGGCTG GTGATCGAGC CGGACAGGCG CACGCCCATC
GTGGTGCGCG GGGATGCCCG GCTGCGCGGA TCGGCCGAGC GGTTCAAGGA CTTGCAGCTC
GCCCGTGGCG ATCAGGGCGA GATCCCCCTA GCCTCGCTGG CGCGCATCGC CACCACCGAT
GGCCCCGTGC TGGTGCGGCG CGAGAACGGT TCGCGCTTCG CGCTGATCCA GTCCAGCGTG
AGCGGGCGCG ATCTGGTCGG CTTCGTAGAT GAAGCGCGCG AAGCCGTGGC GCGCGACGTG
CCGCTGCCGC CCGGCTACCG CGTCGAATGG GGCGGGCAGT TTGAGAACCA GCAACGTGCA
GCGGCCCGCC TAGGCATGGT GGTGCCGGTG GCCCTGGGGC TGATTTTCTT CGTGCTGTTC
ATGACCTTCG GCTCGGTGCG GCAGGCCGCG CTCATCCTCG GCAACGTGCC GTTTGCCATG
GTCGGCGGCG TGGCAGCGCT GTGGCTGTCG GGGCAGTACC TGTCGGTGCC TGCTTCGGTC
GGCTTCATCG CGCTGCTGGG CATCGCCGTG CTCAACGGAT TGGTGCTGGT GACGCACTTC
AACCACCTGC ACGCGCTAGG CCTGCCCATG GAACAGGTGG TGCGCGAAGG TTCGCTGCGA
CGGCTGCGCC CCGTGCTGAT GACGGCTTCC ATCACCGCCT TTGGCCTGGT GCCCCTGCTG
CTGGCCAGTG GCCCTGGCTC TGAGATCCAG CGCCCACTCG CCATCGTGGT GATTGGCGGA
CTGGTCAGTT CCACGGCGCT GACCCTGGTC CTGCTGCCGG TGCTGTACCG GCGATTCGGC
CAGGCCATCT CCTCACAACA AGGAGTCCAC GCATGA
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| Protein sequence | MLSRLIEFSL RQRALVLLGV LALAGAGLAA FLQLPIDAYP DISPTQVKLI IKAPGMTPEE
VESRVITPLE MELLGVPRGV MLRSTAKYAI ADITLDFAEG SDIYWARQQV AERYAGVSGS
LPDGVSGGLA PISTPLSDVF MFTIEGGSLT LSERRALLDW TLRPALRTLP GVADVNVLGG
EAKSFAVVPD RARLSAAGLG FSDVITAIGR NNRNDGAGRL DAGEDTLIVR AEGAIHTLDD
LSRLILRAGA NGTAPVRLGD VAQVRIEGVT RYGAVTRDGA GEAVEGIVVA LRGADASALV
KAIRARLDEV APSLPPGVKV VPFYDRSTLI ERAVGTVESA LLEATVLVVI LLLLFLGELR
AALVVAVMVP LAALGTFLLM RLVGMSANLM SLGGLAIAIG MLVDAAVVVV ENAVSRLDPH
APSAHQPRLH RIFAAAREVA MPVASGILII CLTFMPLLTL QGLEGKLFVP VALTIVFALG
VSLLLSLTLV PVLASLLLKE HAHTEPWVMR WATRLYQPLL EAALHHPLRA SAVAIAALAL
GVVAYLGTGK AFMPTMDEGD ILLQLQKPPS IGLQRSLEID LAVQKAIGAA VPEVRHSIGR
VGSDELGLDP MGLNETDLFM QLAPRKDWHA ADKDALSAEI RKVMDAFPGL EFGFTQPIEM
RISEMLTGSR GDVAVKLFGP DLQTLGDLAQ RMAARIEKVP GVRDVLTQAS DSVEYLQVKV
DAQAAGRAGL AVTQVQDELR AQLEGVPAGL VIEPDRRTPI VVRGDARLRG SAERFKDLQL
ARGDQGEIPL ASLARIATTD GPVLVRRENG SRFALIQSSV SGRDLVGFVD EAREAVARDV
PLPPGYRVEW GGQFENQQRA AARLGMVVPV ALGLIFFVLF MTFGSVRQAA LILGNVPFAM
VGGVAALWLS GQYLSVPASV GFIALLGIAV LNGLVLVTHF NHLHALGLPM EQVVREGSLR
RLRPVLMTAS ITAFGLVPLL LASGPGSEIQ RPLAIVVIGG LVSSTALTLV LLPVLYRRFG
QAISSQQGVH A
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