| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2701 |
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| Symbol | |
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| ID | 5748277 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2969111 |
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| End bp | 2971120 |
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| Gene Length | 2010 bp |
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| Protein Length | 669 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641297796 |
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| Product | conjugal transfer coupling protein TraG |
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| Protein accession | YP_001563724 |
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| Protein GI | 160898142 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.143285 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGGA CGAACGTGCT GTTCGGTCAG ATCGCCGTGG TATTCGGCAT CGTGATCGCC
GGCGTGTGGG CAGCCACACA ATGGACAGCC GCCGCCCTGG GCTATCAGCT ACGCCTTGGC
TCGCCCTGGT TCGACTTCTT CGGTACGCCG GTCTATCACC CGTGGCGGCT GTTCGAGTGG
TGGTTCTTCT TCGATGCCTA CGCGCCCAGC GTCTTTGACA TCGGCGGCGC CATTGCGGGT
GGCAGCGGCC TGGTGGCCGT GCTGGTGGCC ATCGGCATGT CGATCTGGCG CTCGCGGCAA
TCGCGCCTGG TCACGACCTA CGGCTCGGCG CGCTGGGCGA ACGCGGATGA CATTCGCAAG
GCGGGACTCA CGCAGCCGGC CGGCGTGTTC CTCGGCCAGC ACGACCGTCA GTACCTGCGG
CATGAAGGGC CGGAACACGT CCTGACCTTC GCACCCACGC GCAGCGGTAA AGGCGTTGGC
CTGGTGGTGC CGACGCTGCT GTCCTGGCCG GCCTCGGCCG TCATCCACGA CATCAAGGGC
GAGAACTGGC AGATCACCGC AGGCTGGCGC TCGCGCTTCT CGCATTGCCT GCTGTTCAAC
CCGACCGATG CGAAGTCAGC GGCCTACAAC CCGCTGCTGG AGGTGCGTCG CGGCGCCCAT
GAGGTGCGCG ACGTGCAGAA CATCGCGGAC ATCCTGGTCG ATCCCGAAGG CGCGCTGGAG
CGGCGCAACC ATTGGGAGAA GACCAGCCAT GCTCTGCTGG TCGGCGCCAT CCTGCACGTG
CTCTATGCGG GCGAGGACAA GACGCTGCGC GGCGTCGCCA ACTTCCTCTC CGATCCGGCT
TGCCCATTCG AGCTGACGCT GCACCGGATG ATGACCACGC CGCATCTCGG CTATGGCCCG
CATCCGGTCG TCGCATCGGC GGCGCGCGAA GTGCTCAACA AGTCGGACAA CGAGCGTTCC
GGCGTGTTGA GCACGGCCAT GTCGTTCCTC GGCCTGTACC GCGACCCTAC GGTGGCCGAA
GTCACGTCGC GTTGCGATTG GCGCATTGCC GACCTGATCG CGGCCGAGCA TCCGGTATCG
CTGTACCTTG TGGTGCCGCC TTCAGATATT TCGCGGACGA AGCCGCTGAT CCGCCTGATC
CTCAATCAGA TCGGGCGACG GCTGACGGAA TCGCTCGATG GCTCCGACGG CATCGAGCGC
CGCCACAAGC TGCTGCTGAT GCTTGACGAG TTCCCGGCGC TCGGGCGGCT CGACTTCTTC
GAGACGGCAC TGGCCTTCAT GGCGGGCTAT GGCATTCGCA GCTTTCTCAT CGCGCAGTCG
CTCAATCAGA TCGACAAGGC GTATGGGCAG AACCATTCGA TTCTGGACAA CTGCCATGTC
CGCGTGACGT TCGCCACCAA CGACGAACGC ACGGCCAAGC GGATCTCCGA AACGCTGGGC
ACTGCAACCG AGCTGCGCGC ACAGCGCAAC TACGCAGGCC ACCGGCTCGC GCCGTGGCTG
GGCCACCTGA TGGTGTCGCG CCAGGAGACC GCGCGCCCAC TGCTGACGCC GGGCGAAGTG
ATGCAGTTAC CGCCGGATGA AGCCGTGGTG ATGGTGTCCA GCGTGGCGCC GATCAAGGCC
AAAAAGCTGC GCTATTACGC GGACACCAAT TTCAAGCGGC GCGTGCTGCC GCCGCCCGTG
CTTGCGGCCG GACGCTATGC CGACGTTCCG CCCTCGCGAG CCGACGACTG GAGCGGGCTG
GCGATTCCCG CCGTGCCTGC CGCACCGGCC ACTGCACCTA CTGATGGCCT GGAGCACTTG
GGTTCGGCCG ACGACGGCGG ACCGCGCCGT CAGCCCGAAC TTTCCGAAGC CGTCGCCTAC
GACCCCGAGC TGGCCGCGTC CGCAGCCGAC CTCGGGTTGC TCGATGACGA TGACGACCTG
CCGCTTCCCC TTCCTCGCCA GCTTGACCCG GCCATGCAGC GCACGGCCCG GCTGGCTTCC
CTCGACCCCA ACGACGGAAT CGAGCTATGA
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| Protein sequence | MQGTNVLFGQ IAVVFGIVIA GVWAATQWTA AALGYQLRLG SPWFDFFGTP VYHPWRLFEW
WFFFDAYAPS VFDIGGAIAG GSGLVAVLVA IGMSIWRSRQ SRLVTTYGSA RWANADDIRK
AGLTQPAGVF LGQHDRQYLR HEGPEHVLTF APTRSGKGVG LVVPTLLSWP ASAVIHDIKG
ENWQITAGWR SRFSHCLLFN PTDAKSAAYN PLLEVRRGAH EVRDVQNIAD ILVDPEGALE
RRNHWEKTSH ALLVGAILHV LYAGEDKTLR GVANFLSDPA CPFELTLHRM MTTPHLGYGP
HPVVASAARE VLNKSDNERS GVLSTAMSFL GLYRDPTVAE VTSRCDWRIA DLIAAEHPVS
LYLVVPPSDI SRTKPLIRLI LNQIGRRLTE SLDGSDGIER RHKLLLMLDE FPALGRLDFF
ETALAFMAGY GIRSFLIAQS LNQIDKAYGQ NHSILDNCHV RVTFATNDER TAKRISETLG
TATELRAQRN YAGHRLAPWL GHLMVSRQET ARPLLTPGEV MQLPPDEAVV MVSSVAPIKA
KKLRYYADTN FKRRVLPPPV LAAGRYADVP PSRADDWSGL AIPAVPAAPA TAPTDGLEHL
GSADDGGPRR QPELSEAVAY DPELAASAAD LGLLDDDDDL PLPLPRQLDP AMQRTARLAS
LDPNDGIEL
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