| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2695 |
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| Symbol | |
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| ID | 5748271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2963738 |
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| End bp | 2964493 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641297790 |
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| Product | conjugal transfer protein TrbJ |
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| Protein accession | YP_001563718 |
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| Protein GI | 160898136 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5314] Conjugal transfer/entry exclusion protein |
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| TIGRFAM ID | [TIGR02780] P-type conjugative transfer protein TrbJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.833269 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC ATGCCTCCAA ACTCGCCGCG CTGACCGCTG CTTGTGTGCT CGCCTTCGGC
ATCGCGCAAC CCGCGCACGC CTTGTTCGGC GTCGGCGACA TCGTGCTCGA CCCGACCAAT
CTTGTGCAGA ACACGCTCAC GGCGGTTCGC ACGCTGGAGC AGATCAACAA CCAGATCCGC
CAGCTCCAGA ACGAAGCGCA GATGCTCATC AACCAGGCGC GCAATCTGGC CAGCCTGCCG
TCCAGCGTGG TCGGCCAATT GCGCGCCAAT CTGGCGACCA CCCAGCGGCT GATCGCGCAG
GCCAAGGGCC TGGCCTATGA CGTGACGAGC ATCGACCGGG AGTTCGCGCG CCTGTATCCC
GAGAAGTACG CCGCCACTGT GAGCGGCAAT CAGATATACC TCGATGCGCA GGAGCGTTGG
AAGAACACGC TCAACGGCCT GCAAACCACC ATGCAGATGC AGGCACAGGC GTCGCAGAAC
CTGAGCGACG ACGAAAGCGT GCTGGCCGAC CTCGTGGGCA AGAGCCAGTC GGCCGAGGGT
GCGTTGCAAG CGATGCAGGC CATGAACCAG TTGCTGGCCT TGCAGGCCAA GCAGTCGATC
CAGACGCAGC GGCTTCAGAT CACGCAAGAC CGCGCGGCCT CGCTGGAGCT AGCGCGGCAA
GCGGCGGCCA CGGAGCGCGG GCGCGAGGTG ACGCGCCGCT TCCTGGGCGA AGGCACGCCG
TACACGCCGC AGCCCGTCAA TTTCTACAAC CGCTGA
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| Protein sequence | MKTHASKLAA LTAACVLAFG IAQPAHALFG VGDIVLDPTN LVQNTLTAVR TLEQINNQIR
QLQNEAQMLI NQARNLASLP SSVVGQLRAN LATTQRLIAQ AKGLAYDVTS IDREFARLYP
EKYAATVSGN QIYLDAQERW KNTLNGLQTT MQMQAQASQN LSDDESVLAD LVGKSQSAEG
ALQAMQAMNQ LLALQAKQSI QTQRLQITQD RAASLELARQ AAATERGREV TRRFLGEGTP
YTPQPVNFYN R
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