| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2681 |
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| Symbol | |
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| ID | 5748257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2951878 |
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| End bp | 2953353 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641297776 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001563704 |
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| Protein GI | 160898122 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCACG CTAAAACATG CCAGCGCCCC ATCAGCCTCG AAAGACGGCT TGCGGCAACT
TACCTGGTAG CTGGTCTGGT CACCGCCGGT CTGGCCGGTT GCGCCGCCGG CCCTGATTTT
CAGCGTCCCA CGGCTCGCTA CACTGCAACA CCGGTGGCTG ATAGAACCGC GTCCGCTCCC
ACGCAGTTCG GCGAAACACA ACGTCTAGTC GAAGGGCTTC CGATCGAAAC GCAATGGTGG
CAAAGCTTGG GTTCATCCAC ACTCGACGGA CTGATCAACG AAGCTTTCCA TGTCAGCCCG
ACGCTGGCGA GCATCAGCGC CAATTTGCGA CAGGCGCAGG AGCTTCTTGC CGCACAGGCG
GGCTCGACGC AATATCCACA GGTAGATGTC GCACTGGGAT CTCAGCGCCA GCAAATGAGT
CCCAGTAGCC AAGGGTTGAG CGGAGACGCA CGTCAATTCA GCCTCTACAA CGCCAGCGTT
GGCGCGCATT ACAACCTCGA TCTGGCTGGC GGCAACCGGC GCGCACTCGA AGCCTTGGCT
GCTCGCGCCG ACTACCGTCG CTTCGAACTG AATGCTGCGC GCCTGGCCCT TGCCGGCAAC
ATGGCAACCG CTGCCATTAC CCGAGCACGC CTCGCCGCGC AACTAGAAGC CACTACTGCC
ATTTTGCGCG TGCAGGATGA GCAACTGCGC CTAGCCCATG AACGCGTGCG TATCGGTCAG
GCCTCACCTG ATGAAGCGTT GAGCCTACAA GCTCAGGCGG AGCAAACGCG GGCAGAACTG
CCTGCGCTGC GTAAACAACT GCAACAAACC GAACATCTAC TGGCGGTGCT AGCCGGTCGT
GCCCCAGGCA CGGGTGGCAT CCCGGCCTTC ACTCTGGCCG ATTTCACTCT GCCCGTCGAG
ATGCCGCTCG TCGTGCCCTC AGAACTGGTG CGCCGCCGAC CGGATATCCA GGCGTCAGAG
GCGCTGTTGC ATGCGGCCAA TGCAGACTAT GGTGTGGCTG TCGCCAAGCT CTACCCACAG
ATCAACCTGA GCGCCAACCT TGGCTCTCAA GCGCTGACCA CCGGTACCCT GTTCGGTGGT
GGCTCGGCAG TGTGGGGCCT GGTTGCGCAG CTCACCCAGC CTCTTTTTAA TCCAGGGCTA
CCCGCTGAAA AAAGAGCGGC GCTCGCCGCT TTTGATGCCG CCGCAGCCAA TTACCAGAGC
GTCGTATTGG AGTCTTTGCG TAACGTCGCC GACACCCTGC GCGCGGTGGA AAGCGATGCA
CAAACTTTGA CTGCCCTCGC TGCCGCTGAT ATGGCTGCAC AGGCCTCCTT GCAGTCGGTC
GAGCGGCAAT ACCGGCTGGG CGCGGCCAGC TACCTGCAAC TGCTCATCGC GCAGCAACAG
GCACAGTCAA TCCGGATCAA TATGGTTGCG GCCCAGGCAC AACGCCTAGT CGATAGTGTT
GCTTTATATC AGGCCCTGGG AGGTGGTGTC AGTTAA
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| Protein sequence | MEHAKTCQRP ISLERRLAAT YLVAGLVTAG LAGCAAGPDF QRPTARYTAT PVADRTASAP
TQFGETQRLV EGLPIETQWW QSLGSSTLDG LINEAFHVSP TLASISANLR QAQELLAAQA
GSTQYPQVDV ALGSQRQQMS PSSQGLSGDA RQFSLYNASV GAHYNLDLAG GNRRALEALA
ARADYRRFEL NAARLALAGN MATAAITRAR LAAQLEATTA ILRVQDEQLR LAHERVRIGQ
ASPDEALSLQ AQAEQTRAEL PALRKQLQQT EHLLAVLAGR APGTGGIPAF TLADFTLPVE
MPLVVPSELV RRRPDIQASE ALLHAANADY GVAVAKLYPQ INLSANLGSQ ALTTGTLFGG
GSAVWGLVAQ LTQPLFNPGL PAEKRAALAA FDAAAANYQS VVLESLRNVA DTLRAVESDA
QTLTALAAAD MAAQASLQSV ERQYRLGAAS YLQLLIAQQQ AQSIRINMVA AQAQRLVDSV
ALYQALGGGV S
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